RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 MRPL53Q96EL3 112 aaKnown RBP15.81■□□□□ 0.12
CBWD3-202ENST00000377342 PGPA6NDG6 321 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 PRAC2D3DTV9 90 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 BCL2P10415 239 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 RAB14P61106 215 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 GTSCR1Q86UQ5 136 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 APRG1Q8IVJ8 170 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 CCDC28AQ8IWP9 274 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 ZNF738Q8NE65 137 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 CLEC5AQ9NY25 188 aa15.8■□□□□ 0.12
CBWD3-202ENST00000377342 OR11H12B2RN74 326 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 F6UB75 175 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 SUMO1P63165 101 aaKnown RBP15.79■□□□□ 0.12
CBWD3-202ENST00000377342 HAGHQ16775 308 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 GDF5OSQ5U4N7 250 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 RPUSD4Q96CM3 377 aaKnown RBP15.79■□□□□ 0.12
CBWD3-202ENST00000377342 PRELID1Q9Y255 219 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 LOC102723971A0A1B0GUV8 181 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 GNG5P63218 68 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 CST9LP1Q5W188 147 aa15.79■□□□□ 0.12
CBWD3-202ENST00000377342 IFNA1P01562 189 aa15.78■□□□□ 0.12
CBWD3-202ENST00000377342 C5orf17Q8NAS9 161 aa15.78■□□□□ 0.12
CBWD3-202ENST00000377342 CITED4Q96RK1 184 aa15.78■□□□□ 0.12
CBWD3-202ENST00000377342 ZMAT5Q9UDW3 170 aaKnown RBP15.78■□□□□ 0.12
CBWD3-202ENST00000377342 SLC25A5P05141 298 aaKnown RBP15.77■□□□□ 0.12
CBWD3-202ENST00000377342 FAM210AQ96ND0 272 aa15.77■□□□□ 0.12
CBWD3-202ENST00000377342 RARRES2Q99969 163 aa15.77■□□□□ 0.12
CBWD3-202ENST00000377342 KNCNA6PVL3 124 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 C11orf94C9JXX5 98 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 DEFB125Q8N687 156 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 NKX6-2Q9C056 277 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 SAV1Q9H4B6 383 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 IGKV2-40A0A087WW87 121 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 DIRC3C9JPN6 131 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 IGKV2D-40P01614 121 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 ZNF705DP0CH99 300 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 ZNF705BP0CI00 300 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 CMC4P56277 68 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 MEF2BQ02080 365 aaPredicted RBP15.76■□□□□ 0.11
CBWD3-202ENST00000377342 TOR2AQ5JU69 321 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 FOXI2Q6ZQN5 318 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 CMTM2Q8TAZ6 248 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 RPH3ALQ9UNE2 315 aa15.76■□□□□ 0.11
CBWD3-202ENST00000377342 A0A0J9YX75 114 aa15.75■□□□□ 0.11
CBWD3-202ENST00000377342 PRB2P02812 416 aaPredicted RBP15.75■□□□□ 0.11
CBWD3-202ENST00000377342 ZNF506Q5JVG8 444 aa15.75■□□□□ 0.11
CBWD3-202ENST00000377342 VAX2Q9UIW0 290 aa15.75■□□□□ 0.11
CBWD3-202ENST00000377342 EPDR1Q9UM22 224 aa15.75■□□□□ 0.11
CBWD3-202ENST00000377342 RBFOX3A6NFN3 312 aa15.74■□□□□ 0.11
CBWD3-202ENST00000377342 TCRAP04437 139 aa15.74■□□□□ 0.11
CBWD3-202ENST00000377342 ACTL10Q5JWF8 245 aa15.74■□□□□ 0.11
CBWD3-202ENST00000377342 OR8A1Q8NGG7 326 aa15.74■□□□□ 0.11
CBWD3-202ENST00000377342 RXFP4Q8TDU9 374 aa15.74■□□□□ 0.11
CBWD3-202ENST00000377342 SCO2A0A1W2PP80 73 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 HLA-DRB4P13762 266 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 TAGLN2P37802 199 aaKnown RBP15.73■□□□□ 0.11
CBWD3-202ENST00000377342 ARL6IP6Q8N6S5 226 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 AURKAIP1Q9NWT8 199 aaPredicted RBP15.73■□□□□ 0.11
CBWD3-202ENST00000377342 HLA-DRB4X5D2U9 266 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 PEX7O00628 323 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 CSN1S1P47710 185 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 GOLT1AQ6ZVE7 132 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 TXNDC17Q9BRA2 123 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 TCEAL7Q9BRU2 100 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 ATG101Q9BSB4 218 aa15.73■□□□□ 0.11
CBWD3-202ENST00000377342 H3BMM0 161 aa15.72■□□□□ 0.11
CBWD3-202ENST00000377342 CNN1P51911 297 aaKnown RBP15.72■□□□□ 0.11
CBWD3-202ENST00000377342 SRSF3P84103 164 aaKnown RBP15.72■□□□□ 0.11
CBWD3-202ENST00000377342 HIST1H1AQ02539 215 aaPredicted RBP15.72■□□□□ 0.11
CBWD3-202ENST00000377342 VGLL1Q99990 258 aa15.72■□□□□ 0.11
CBWD3-202ENST00000377342 RBMY1BA6NDE4 496 aaKnown RBP15.71■□□□□ 0.11
CBWD3-202ENST00000377342 RBMY1EA6NEQ0 496 aaKnown RBP15.71■□□□□ 0.11
CBWD3-202ENST00000377342 NPIPB6E9PJ23 425 aa15.71■□□□□ 0.11
CBWD3-202ENST00000377342 RBMY1DP0C7P1 496 aaKnown RBP15.71■□□□□ 0.11
CBWD3-202ENST00000377342 CYB561D1Q8N8Q1 229 aa15.71■□□□□ 0.11
CBWD3-202ENST00000377342 C11orf52Q96A22 123 aa15.71■□□□□ 0.11
CBWD3-202ENST00000377342 SRD5A3Q9H8P0 318 aa15.71■□□□□ 0.11
CBWD3-202ENST00000377342 TRAV8-1A0A0A6YYK1 113 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 RBAKDNA6NC62 111 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 A8MTW9 85 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 ERCC8Q13216 396 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 EBLN2Q6P2I7 272 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 TRPT1Q86TN4 253 aaKnown RBP15.7■□□□□ 0.1
CBWD3-202ENST00000377342 HIST1H2BAQ96A08 127 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 EIF5A2Q9GZV4 153 aaKnown RBP15.7■□□□□ 0.1
CBWD3-202ENST00000377342 C9orf47Q6ZRZ4 202 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 C2CD4CQ8TF44 421 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 LINC00479Q96M42 142 aa15.7■□□□□ 0.1
CBWD3-202ENST00000377342 IGLV2-11P01706 119 aa15.69■□□□□ 0.1
CBWD3-202ENST00000377342 IGHV4-30-4P0DP06 118 aa15.69■□□□□ 0.1
CBWD3-202ENST00000377342 OR10J6PQ8NGY7 276 aa15.69■□□□□ 0.1
CBWD3-202ENST00000377342 Q8TAT8 98 aa15.69■□□□□ 0.1
CBWD3-202ENST00000377342 AGPAT4-IT1Q9H0P7 198 aa15.69■□□□□ 0.1
CBWD3-202ENST00000377342 MED9Q9NWA0 146 aa15.69■□□□□ 0.1
CBWD3-202ENST00000377342 MEGF8Q7Z7M0 2845 aa15.68■□□□□ 0.1
CBWD3-202ENST00000377342 SERTM2A0A1B0GWG4 89 aa15.68■□□□□ 0.1
CBWD3-202ENST00000377342 C9JQL5 133 aa15.68■□□□□ 0.1
CBWD3-202ENST00000377342 K7EIL1 84 aa15.68■□□□□ 0.1
CBWD3-202ENST00000377342 PDE6DO43924 150 aa15.68■□□□□ 0.1
CBWD3-202ENST00000377342 IGKV3-20P01619 116 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms