RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 FXYD7P58549 80 aa10.91□□□□□ -0.66
C9orf47-203ENST00000375851 DPH3P1Q9H4G8 78 aa10.91□□□□□ -0.66
C9orf47-203ENST00000375851 GGTLC3B5MD39 225 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 C3orf79P0CE67 100 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 C21orf62-AS1Q17RA5 79 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 ZNF876PQ49A33 203 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 DMRTC2Q8IXT2 367 aaPredicted RBP10.9□□□□□ -0.66
C9orf47-203ENST00000375851 NHP2Q9NX24 153 aaKnown RBP10.9□□□□□ -0.66
C9orf47-203ENST00000375851 PCDH15Q96QU1 1955 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 TRBV19A0A075B6N1 114 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 CMC4P56277 68 aaPredicted RBP10.9□□□□□ -0.66
C9orf47-203ENST00000375851 GTSCR1Q86UQ5 136 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 SPCS1Q9Y6A9 102 aa10.9□□□□□ -0.66
C9orf47-203ENST00000375851 ARMS2P0C7Q2 107 aa10.9□□□□□ -0.67
C9orf47-203ENST00000375851 KRTAP27-1Q3LI81 207 aa10.9□□□□□ -0.67
C9orf47-203ENST00000375851 CD300EQ496F6 205 aaPredicted RBP10.9□□□□□ -0.67
C9orf47-203ENST00000375851 Q5PR19 223 aa10.9□□□□□ -0.67
C9orf47-203ENST00000375851 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.67
C9orf47-203ENST00000375851 LINC01549A6NIU2 74 aa10.89□□□□□ -0.67
C9orf47-203ENST00000375851 H3BUT2 72 aa10.89□□□□□ -0.67
C9orf47-203ENST00000375851 MRPL27Q9P0M9 148 aaKnown RBP10.89□□□□□ -0.67
C9orf47-203ENST00000375851 SPRNQ5BIV9 151 aa10.89□□□□□ -0.67
C9orf47-203ENST00000375851 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
C9orf47-203ENST00000375851 RNF182Q8N6D2 247 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 C5orf30Q96GV9 206 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 SLC25A2Q9BXI2 301 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 SMPXQ9UHP9 88 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 SMKR1H3BMG3 65 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 CHCHD5Q9BSY4 110 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 DYSFO75923 2080 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 A0A1B0GWB2 263 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 COL4A3Q01955 1670 aa10.88□□□□□ -0.67
C9orf47-203ENST00000375851 TYMSP04818 313 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 IGLC1P0CG04 106 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 MS4A6AQ9H2W1 248 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 GFRA4Q9GZZ7 299 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 TRGV1A0A0A0MS02 117 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 LHBP01229 141 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 SFTA2Q6UW10 78 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 ZNF492Q9P255 531 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 DEFB131AP59861 70 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 ZNF415Q09FC8 603 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 UBE2E2Q96LR5 201 aa10.87□□□□□ -0.67
C9orf47-203ENST00000375851 IL17RELQ6ZVW7 336 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 DPH3Q96FX2 82 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 CCDC168Q8NDH2 2452 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 IGF2RP11717 2491 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 VCYO14598 125 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 TMEM75Q8N9X5 138 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 FNDC4Q9H6D8 234 aaPredicted RBP10.86□□□□□ -0.67
C9orf47-203ENST00000375851 IGHV2-70P01814 119 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 PRR20EP86478 221 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 PRR20CP86479 221 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 PRR20DP86480 221 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 PRR20BP86481 221 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 PRR20AP86496 221 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 CFAP161Q6P656 301 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 ZNF114Q8NC26 417 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 ORAOV1Q8WV07 137 aa10.86□□□□□ -0.67
C9orf47-203ENST00000375851 FAM231BA6NCW3 169 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 SYS1-DBNDD2H3BUS1 97 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 RPL35AP18077 110 aaKnown RBP10.85□□□□□ -0.67
C9orf47-203ENST00000375851 LINC00469Q8N7U9 141 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 PIEZO2Q9H5I5 2752 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
C9orf47-203ENST00000375851 CR1LQ2VPA4 569 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 TMEM158Q8WZ71 300 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
C9orf47-203ENST00000375851 hDV102S1A0JD36 115 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 Q96MF0 132 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 CSTL1Q9H114 145 aa10.85□□□□□ -0.67
C9orf47-203ENST00000375851 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 A0A087WWL8 130 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 WDR87Q6ZQQ6 2873 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 WISP2O76076 250 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 CT83Q5H943 113 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 C10orf91Q5T1B1 145 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 SEM1Q6ZVN7 128 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 C8orf31Q8N9H6 132 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 A0A0U1RRA0 63 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 A0A1B0GUS0 222 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 C1orf122Q6ZSJ8 110 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 EML6Q6ZMW3 1958 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 TRAV2A0A0B4J234 112 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 IGLC7A0M8Q6 106 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 ADARB2-AS1A8MUL3 147 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 IGHV3-53P01767 116 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 Q0VG73 95 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 THAP8Q8NA92 274 aa10.84□□□□□ -0.67
C9orf47-203ENST00000375851 H3BRN7 92 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 PLNP26678 52 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 OR2K2Q8NGT1 345 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms