RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 UBE2E2Q96LR5 201 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 GEMIN7Q9H840 131 aaKnown RBP14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 H7C1H1 209 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 SH2D1AO60880 128 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 HOXB4P17483 251 aaPredicted RBP14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 YPEL3P61236 119 aaPredicted RBP14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 CRIP3Q6Q6R5 217 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 Q6ZPA2 131 aa14.27□□□□□ -0.12
PTPDC1-202ENST00000375360 C5orf52A6NGY3 159 aa14.27□□□□□ -0.13
PTPDC1-202ENST00000375360 C5orf30Q96GV9 206 aa14.27□□□□□ -0.13
PTPDC1-202ENST00000375360 TMEM95Q3KNT9 176 aa14.27□□□□□ -0.13
PTPDC1-202ENST00000375360 ARL6IP6Q8N6S5 226 aa14.27□□□□□ -0.13
PTPDC1-202ENST00000375360 IGHV3-73A0A0B4J1V6 119 aa14.26□□□□□ -0.13
PTPDC1-202ENST00000375360 ZFP36P26651 326 aaKnown RBP14.26□□□□□ -0.13
PTPDC1-202ENST00000375360 TMEM249Q2WGJ8 235 aa14.26□□□□□ -0.13
PTPDC1-202ENST00000375360 LEPP41159 167 aa14.26□□□□□ -0.13
PTPDC1-202ENST00000375360 NIT1Q86X76 327 aa14.26□□□□□ -0.13
PTPDC1-202ENST00000375360 RIPPLY3P57055 190 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 BLCAPP62952 87 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 OR10J3Q5JRS4 329 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 ZNF114Q8NC26 417 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 HIST1H2BLQ99880 126 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 MIEN1Q9BRT3 115 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 DEFB131AP59861 70 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 NCKAP5O14513 1909 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 A6NDN8 102 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 HOXA3O43365 443 aaPredicted RBP14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 FOSL1P15407 271 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 RPL35AP18077 110 aaKnown RBP14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 RPL24P83731 157 aaKnown RBP14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 SLC25A2Q9BXI2 301 aa14.25□□□□□ -0.13
PTPDC1-202ENST00000375360 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 LYPD1Q8N2G4 141 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 OR11H6Q8NGC7 330 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 PKD1L2Q7Z442 2459 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 C19orf84I3L1E1 186 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 CTAG1AP78358 180 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 FBXL19-AS1Q494R0 122 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 TRBV19A0A075B6N1 114 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 D6R8Y8 96 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 Q86TA4 180 aa14.24□□□□□ -0.13
PTPDC1-202ENST00000375360 IGLV2-14P01704 120 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 HIST1H4GQ99525 98 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PRDM13Q9H4Q3 707 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 TANC2Q9HCD6 1990 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 CENPVL3A0A0U1RRI6 287 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 OR11H12B2RN74 326 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PRR20EP86478 221 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PRR20CP86479 221 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PRR20DP86480 221 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PRR20BP86481 221 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PRR20AP86496 221 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 COL5A1-AS1Q5SY13 56 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 OR11H1Q8NG94 326 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 OR11H2Q8NH07 326 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 F2Z2F3 143 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PROP1O75360 226 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 GTF2H5Q6ZYL4 71 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 PPP1R17O96001 155 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 C17orf77Q96MU5 243 aa14.23□□□□□ -0.13
PTPDC1-202ENST00000375360 RPLP1P05386 114 aaKnown RBP14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 DMRT1Q9Y5R6 373 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 C14orf178Q8N769 122 aaPredicted RBP14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 CHD9Q3L8U1 2897 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 SMAGPQ0VAQ4 97 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 ZNF491Q8N8L2 437 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 LINC00477Q96M19 166 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 E7EUB6 86 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 SMKR1H3BMG3 65 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 J3QR89 54 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 AMBPP02760 352 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 DMRTA1Q5VZB9 504 aa14.22□□□□□ -0.13
PTPDC1-202ENST00000375360 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.21□□□□□ -0.13
PTPDC1-202ENST00000375360 ATP5LO75964 103 aa14.21□□□□□ -0.13
PTPDC1-202ENST00000375360 ST20Q9HBF5 79 aa14.21□□□□□ -0.13
PTPDC1-202ENST00000375360 NDUFA3O95167 84 aa14.21□□□□□ -0.13
PTPDC1-202ENST00000375360 LGALS3P17931 250 aaKnown RBP14.21□□□□□ -0.13
PTPDC1-202ENST00000375360 AMN1Q8IY45 258 aa14.21□□□□□ -0.13
PTPDC1-202ENST00000375360 ARMS2P0C7Q2 107 aa14.21□□□□□ -0.14
PTPDC1-202ENST00000375360 PDE6HQ13956 83 aa14.21□□□□□ -0.14
PTPDC1-202ENST00000375360 HIST3H2BBQ8N257 126 aa14.21□□□□□ -0.14
PTPDC1-202ENST00000375360 ZMAT5Q9UDW3 170 aaKnown RBP14.21□□□□□ -0.14
PTPDC1-202ENST00000375360 IGLV1-47P01700 117 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 PAPPA-AS1Q5QFB9 102 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 Q8N7P7 452 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 GSN-AS1Q9NRJ2 163 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 LY96Q9Y6Y9 160 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 IGKV3D-20A0A0C4DH25 116 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 LOC107984156A0A0G2JMH3 177 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 A0A1B0GUS0 222 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 ARL17AQ8IVW1 177 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 C8orf31Q8N9H6 132 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 C10orf105Q8TEF2 133 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 C8orf49Q96NF6 230 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 FLNBO75369 2602 aaKnown RBP14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 IGHV3-53P01767 116 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 DNLZQ5SXM8 178 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 PLA2G2EQ9NZK7 142 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 LOC102724200A0A096LPH7 203 aaPredicted RBP14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 HLA-DMBP28068 263 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms