RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 PRR20EP86478 221 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 PRR20CP86479 221 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 PRR20DP86480 221 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 PRR20BP86481 221 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 PRR20AP86496 221 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 ETDBQ3ZM63 59 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 IGFBPL1Q8WX77 278 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 LSM4Q9Y4Z0 139 aaKnown RBP8.25□□□□□ -1.09
PTCH1-204ENST00000375290 STPG4Q8N801 248 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 JPT2Q9H910 190 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 OBSL1O75147 1896 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 A0A087WX48 190 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 ATOX1O00244 68 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 INSP01308 110 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 IGHG3P01860 377 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 ZNF747Q9BV97 191 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 H3BUA1 57 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 LINC01587Q99440 93 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 SMIM2Q9BVW6 85 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 ZNF71Q9NQZ8 489 aaPredicted RBP8.25□□□□□ -1.09
PTCH1-204ENST00000375290 EFNA2O43921 213 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 CCL3L1P16619 93 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 ZNF726P1Q15940 193 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 PRR25Q96S07 402 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 A0A087WV48 116 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 STPG1Q5TH74 334 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 CD177Q8N6Q3 437 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 SHANK1Q9Y566 2161 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 IGHV1-46P01743 117 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 TIMM23O14925 209 aa8.25□□□□□ -1.09
PTCH1-204ENST00000375290 SPAG8Q99932 426 aaPredicted RBP8.24□□□□□ -1.09
PTCH1-204ENST00000375290 ERCC8Q13216 396 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 MRPL23Q16540 153 aaKnown RBP8.24□□□□□ -1.09
PTCH1-204ENST00000375290 GAGE2AQ6NT46 116 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 TMEM200BQ69YZ2 307 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 ARMS2P0C7Q2 107 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 HERV-K104P63124 156 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 CCL19Q99731 98 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 TICRRQ7Z2Z1 1910 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 HERVK_113P63121 156 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 TRAV40A0A0B4J280 105 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 EVI2AP22794 236 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
PTCH1-204ENST00000375290 FAM168AQ92567 244 aa8.24□□□□□ -1.09
PTCH1-204ENST00000375290 H3BRN7 92 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 KAAG1Q9UBP8 84 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 J3KT08 172 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 DENND4CQ5VZ89 1909 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 A0A1W2PRD5 423 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 A0A1W2PRF3 423 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 A0A1W2PRM7 423 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 FOXC1Q12948 553 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 FDCSPQ8NFU4 85 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 A0A0G2JRQ6 117 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 TEX36Q5VZQ5 186 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 C20orf204Q6ZNR8 217 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 SSC4DQ8WTU2 575 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 LAMTOR3Q9UHA4 124 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 IGHV3-48P01763 117 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 SCRT2Q9NQ03 307 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 NACAE9PAV3 2078 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 IGKV1-6A0A0C4DH72 117 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 HIST1H4AP62805 103 aaKnown RBP8.23□□□□□ -1.09
PTCH1-204ENST00000375290 DOCK7Q96N67 2140 aa8.23□□□□□ -1.09
PTCH1-204ENST00000375290 STHQ8IWL8 128 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 FAM110DQ8TAY7 271 aaPredicted RBP8.22□□□□□ -1.09
PTCH1-204ENST00000375290 HS3ST6Q96QI5 342 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 CELA3BP08861 270 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 LTBRP36941 435 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 C1orf122Q6ZSJ8 110 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 H0YGX0 51 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 B3GALT5-AS1P59052 145 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 CSRP2Q16527 193 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 NDUFC2O95298 119 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 VMO1Q7Z5L0 202 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 IGKV1D-17A0A075B6S4 117 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 H3BT86 120 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 ANKRD29Q8N6D5 301 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 PIFOQ8TCI5 191 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 GAFA1Q96PS6 74 aa8.22□□□□□ -1.09
PTCH1-204ENST00000375290 ATP5J2P56134 94 aa8.21□□□□□ -1.09
PTCH1-204ENST00000375290 ZNF876PQ49A33 203 aa8.21□□□□□ -1.09
PTCH1-204ENST00000375290 TOMM7Q9P0U1 55 aa8.21□□□□□ -1.09
PTCH1-204ENST00000375290 A0A1W2PPI3 338 aa8.21□□□□□ -1.09
PTCH1-204ENST00000375290 SRRM4A7MD48 611 aaKnown RBP8.21□□□□□ -1.09
PTCH1-204ENST00000375290 FGF6P10767 208 aa8.21□□□□□ -1.1
PTCH1-204ENST00000375290 C9orf106Q8NAJ2 232 aa8.21□□□□□ -1.1
PTCH1-204ENST00000375290 PKIGQ9Y2B9 76 aa8.21□□□□□ -1.1
PTCH1-204ENST00000375290 FXYD5Q96DB9 178 aa8.21□□□□□ -1.1
PTCH1-204ENST00000375290 C12orf74Q32Q52 190 aa8.21□□□□□ -1.1
PTCH1-204ENST00000375290 TP53TG1Q9Y2A0 90 aa8.21□□□□□ -1.1
PTCH1-204ENST00000375290 TRAV12-3A0A0B4J271 114 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 SS18Q15532 418 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 CCL25O15444 150 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 PF4P02776 101 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 SPINK2P20155 84 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 LINC00158P58513 81 aa8.2□□□□□ -1.1
PTCH1-204ENST00000375290 PAX4O43316 350 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms