RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 PPP1R1AQ13522 171 aa9.7□□□□□ -0.86
PTCH1-202ENST00000375271 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
PTCH1-202ENST00000375271 FUT9Q9Y231 359 aa9.7□□□□□ -0.86
PTCH1-202ENST00000375271 H3BTX0 84 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 J3QL48 77 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 METTL15P1P0C7V9 234 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 SLAQ13239 276 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 SPCS2Q15005 226 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 PYDC2Q56P42 97 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 C10orf113Q5VZT2 155 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 Q6ZRN7 208 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-202ENST00000375271 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 ODF3Q96PU9 254 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 GSN-AS1Q9NRJ2 163 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 LY96Q9Y6Y9 160 aa9.69□□□□□ -0.86
PTCH1-202ENST00000375271 FNDC10F2Z333 226 aa9.68□□□□□ -0.86
PTCH1-202ENST00000375271 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
PTCH1-202ENST00000375271 RAB31Q13636 194 aa9.68□□□□□ -0.86
PTCH1-202ENST00000375271 Q6ZRG5 221 aa9.68□□□□□ -0.86
PTCH1-202ENST00000375271 Q6ZSN1 163 aa9.68□□□□□ -0.86
PTCH1-202ENST00000375271 RAB2BQ8WUD1 216 aa9.68□□□□□ -0.86
PTCH1-202ENST00000375271 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
PTCH1-202ENST00000375271 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
PTCH1-202ENST00000375271 A0A087WTM6 91 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 C7orf71A4D174 169 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 NPIPB6E9PJ23 425 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 AGPAT2O15120 278 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 SMR3BP02814 79 aaPredicted RBP9.67□□□□□ -0.86
PTCH1-202ENST00000375271 DNAH10OSP0CZ25 163 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 EVI2AP22794 236 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 GCSHP23434 173 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 INPP1P49441 399 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 XGP55808 180 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 MRPL23Q16540 153 aaKnown RBP9.67□□□□□ -0.86
PTCH1-202ENST00000375271 GUK1Q16774 197 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 EIF4E3Q8N5X7 224 aaKnown RBP9.67□□□□□ -0.86
PTCH1-202ENST00000375271 SMIM8Q96KF7 97 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 ARPC5LQ9BPX5 153 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
PTCH1-202ENST00000375271 PRO0255Q9UI72 69 aa9.67□□□□□ -0.86
PTCH1-202ENST00000375271 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 K7EPK0 472 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 SLC17A3O00476 420 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 RGS13O14921 159 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 MRPS12O15235 138 aaKnown RBP9.66□□□□□ -0.86
PTCH1-202ENST00000375271 PSCAO43653 123 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 UBE2MP61081 183 aaKnown RBP9.66□□□□□ -0.86
PTCH1-202ENST00000375271 ID3Q02535 119 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 PATE2Q6UY27 113 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 ZNF431Q8TF32 576 aaPredicted RBP9.66□□□□□ -0.86
PTCH1-202ENST00000375271 MSRB1Q9NZV6 116 aa9.66□□□□□ -0.86
PTCH1-202ENST00000375271 L7N2F9 121 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 ZNF324O75467 553 aaPredicted RBP9.65□□□□□ -0.86
PTCH1-202ENST00000375271 SMIM18P0DKX4 95 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 CT45A10P0DMU9 189 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 SRIP30626 198 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 TNFSF8P32971 234 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 VAMP2P63027 116 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 NEGR1Q7Z3B1 354 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 OR1L4Q8NGR5 311 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 DEDD2Q8WXF8 326 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 ST6GAL2Q96JF0 529 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 LINC00467Q9BRT7 94 aa9.65□□□□□ -0.86
PTCH1-202ENST00000375271 TRGV4A0A0C4DH28 118 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 LINC00854A0A1B0GVQ3 168 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 K7EP13 123 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 TSC22D2O75157 780 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 MPDU1O75352 247 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 CCNKO75909 580 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 GPX1P07203 203 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
PTCH1-202ENST00000375271 KRTAP10-1P60331 282 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 OPCMLQ14982 345 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 TMEM14EPQ6UXP3 125 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 C12orf45Q8N5I9 185 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-202ENST00000375271 DYNC2LI1Q8TCX1 351 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 PFDN5Q99471 154 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 BCL7BQ9BQE9 202 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 GGACTQ9BVM4 153 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 MDFICQ9P1T7 246 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 TNFRSF18Q9Y5U5 241 aa9.64□□□□□ -0.87
PTCH1-202ENST00000375271 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 CAMLGP49069 296 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 TCL1AP56279 114 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 TAS2R30P59541 319 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 BTN1A1Q13410 526 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 IAH1Q2TAA2 248 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-202ENST00000375271 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 AAMDCQ9H7C9 122 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 MRPL16Q9NX20 251 aaKnown RBP9.63□□□□□ -0.87
PTCH1-202ENST00000375271 GSKIPQ9P0R6 139 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 HHLA3Q9XRX5 114 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 TIMM9Q9Y5J7 89 aa9.63□□□□□ -0.87
PTCH1-202ENST00000375271 C9orf170A2RU37 121 aa9.62□□□□□ -0.87
PTCH1-202ENST00000375271 E5RGE8 158 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms