RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 HAPLN4Q86UW8 402 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 CYTL1Q9NRR1 136 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 LRRC37A2A6NM11 1700 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 VCYO14598 125 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 DEFB136Q30KP8 78 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
NOTCH4-201ENST00000375023 SIGMAR1Q99720 223 aa11.88□□□□□ -0.51
NOTCH4-201ENST00000375023 HIST3H2BBQ8N257 126 aa11.88□□□□□ -0.51
NOTCH4-201ENST00000375023 HSD52Q0P140 79 aa11.88□□□□□ -0.51
NOTCH4-201ENST00000375023 GAS1P54826 345 aa11.88□□□□□ -0.51
NOTCH4-201ENST00000375023 F8W735 103 aaPredicted RBP11.88□□□□□ -0.51
NOTCH4-201ENST00000375023 TRAV25A0A0B4J276 109 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 C15orf62A8K5M9 175 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 SRSF2Q01130 221 aaKnown RBP11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 NKAPP1Q8N9T2 125 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 Q6ZRM9 215 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 M0R1W7 72 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 B3GALT5-AS1P59052 145 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 FAM120AOSQ5T036 256 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 DOCK11Q5JSL3 2073 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 C1QTNF4Q9BXJ3 329 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 FAM90A9PA6NNJ1 464 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 C9orf139Q6ZV77 190 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 DEFB105AQ8NG35 78 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 NDUFAF3Q9BU61 184 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 LIME1Q9H400 295 aa11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 DAZ1Q9NQZ3 744 aaKnown RBP11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 EP300Q09472 2414 aaPredicted RBP11.87□□□□□ -0.51
NOTCH4-201ENST00000375023 NDUFB8O95169 186 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 LGALS1P09382 135 aaKnown RBP11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 AZU1P20160 251 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 FAM223BA6NKX1 122 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 FAM223AQ8IWN6 122 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 MPV17L2Q567V2 206 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 DEFB4AO15263 64 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 SPRY2O43597 315 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 PMVKQ15126 192 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 NMSQ5H8A3 153 aa11.86□□□□□ -0.51
NOTCH4-201ENST00000375023 C3orf79P0CE67 100 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 RPL18AQ02543 176 aaKnown RBP11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 GTSF1LQ9H1H1 148 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 TP53TG1Q9Y2A0 90 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 ZC2HC1BQ5TFG8 222 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 ATP6V0BQ99437 205 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 TPSG1Q9NRR2 321 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 GHRHP01286 108 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 RASL11AQ6T310 242 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 USMG5Q96IX5 58 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 SBF1O95248 1867 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 C9JAW5 83 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 PLEKHB2Q96CS7 222 aa11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 CNOT1A5YKK6 2376 aaKnown RBP11.85□□□□□ -0.51
NOTCH4-201ENST00000375023 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 IGLL5B9A064 214 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 GBF1Q92538 1859 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 FGF16O43320 207 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 DIAPH2-AS1Q14236 149 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 Q6ZQT7 251 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 CMC4P56277 68 aaPredicted RBP11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 LHFPL1Q86WI0 220 aa11.84□□□□□ -0.51
NOTCH4-201ENST00000375023 IGKV1-39P01597 117 aa11.83□□□□□ -0.51
NOTCH4-201ENST00000375023 IGKV1D-39P04432 117 aa11.83□□□□□ -0.51
NOTCH4-201ENST00000375023 KIR3DS1Q14943 382 aa11.83□□□□□ -0.51
NOTCH4-201ENST00000375023 TICRRQ7Z2Z1 1910 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 UBE2CO00762 179 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 ZNRF2Q8NHG8 242 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 TRAV12-1A0A0B4J245 112 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 CYYR1Q96J86 154 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 DEFB113Q30KQ7 82 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 Q86TA4 180 aa11.83□□□□□ -0.52
NOTCH4-201ENST00000375023 CD5P06127 495 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 SNHG12Q9BXW3 62 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 CLPSL1A2RUU4 121 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 COLCA2A8K830 154 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 FBLN5Q9UBX5 448 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 WDR90Q96KV7 1748 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 SYS1-DBNDD2H3BUS1 97 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 TCTEX1D4Q5JR98 221 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 TMEM14EPQ6UXP3 125 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 CRIPAKQ8N1N5 446 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 RS1O15537 224 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 MST1LQ2TV78 715 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 ZFAND6Q6FIF0 208 aa11.82□□□□□ -0.52
NOTCH4-201ENST00000375023 IGHV4-4A0A075B6R2 117 aa11.81□□□□□ -0.52
NOTCH4-201ENST00000375023 MYMXA0A1B0GTQ4 84 aa11.81□□□□□ -0.52
NOTCH4-201ENST00000375023 TNFSF13O75888 250 aa11.81□□□□□ -0.52
NOTCH4-201ENST00000375023 Q6ZS92 163 aa11.81□□□□□ -0.52
NOTCH4-201ENST00000375023 ABCA1O95477 2261 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms