RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 PRELID1Q9Y255 219 aa13.46□□□□□ -0.25
PBX3-205ENST00000373492 EIF3GO75821 320 aaKnown RBP eCLIP13.45□□□□□ -0.26
PBX3-205ENST00000373492 NDUFB4O95168 129 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 IGKV3-20P01619 116 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 STAG3L2P0CL84 134 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 STAG3L3P0CL85 134 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 DEFB135Q30KP9 77 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 STOML3Q8TAV4 291 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
PBX3-205ENST00000373492 C1QTNF4Q9BXJ3 329 aa13.45□□□□□ -0.26
PBX3-205ENST00000373492 CTXND1A0A1B0GTU2 59 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 CXorf1O96002 111 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 LYPD1Q8N2G4 141 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 OR8A1Q8NGG7 326 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 OR10J6PQ8NGY7 276 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 RETNQ9HD89 108 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 TP53TG1Q9Y2A0 90 aa13.44□□□□□ -0.26
PBX3-205ENST00000373492 ZNF705FA8MVS1 300 aaPredicted RBP13.43□□□□□ -0.26
PBX3-205ENST00000373492 UMAD1C9J7I0 102 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 SPRY2O43597 315 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 CNN1P51911 297 aaKnown RBP13.43□□□□□ -0.26
PBX3-205ENST00000373492 RANP62826 216 aaKnown RBP13.43□□□□□ -0.26
PBX3-205ENST00000373492 HIST1H1AQ02539 215 aaPredicted RBP13.43□□□□□ -0.26
PBX3-205ENST00000373492 ICAM4Q14773 271 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 EIF5AL1Q6IS14 154 aaKnown RBP13.43□□□□□ -0.26
PBX3-205ENST00000373492 SLC51BQ86UW2 128 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 EXOC3-AS1Q8N2X6 119 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 PHYHIPLQ96FC7 376 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 PPP1R14DQ9NXH3 145 aa13.43□□□□□ -0.26
PBX3-205ENST00000373492 C3orf84H3BNL1 204 aa13.42□□□□□ -0.26
PBX3-205ENST00000373492 ZNF705DP0CH99 300 aaPredicted RBP13.42□□□□□ -0.26
PBX3-205ENST00000373492 ZNF705BP0CI00 300 aaPredicted RBP13.42□□□□□ -0.26
PBX3-205ENST00000373492 FAM74A1Q5RGS3 127 aa13.42□□□□□ -0.26
PBX3-205ENST00000373492 C9orf62Q8N4C0 152 aa13.42□□□□□ -0.26
PBX3-205ENST00000373492 RNF183Q96D59 192 aa13.42□□□□□ -0.26
PBX3-205ENST00000373492 A8MTW9 85 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 GCHFRP30047 84 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 IQCF2Q8IXL9 164 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 MUC7Q8TAX7 377 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 TMED6Q8WW62 240 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 OVOL2Q9BRP0 275 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 Q9H3A6 140 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 TMEM167BQ9NRX6 74 aa13.41□□□□□ -0.26
PBX3-205ENST00000373492 DNAH7Q8WXX0 4024 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 M0R3E3 92 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 CSN1S1P47710 185 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 ZNF726P1Q15940 193 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 DPPA3Q6W0C5 159 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 SSX7Q7RTT5 188 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 XCL2Q9UBD3 114 aa13.4□□□□□ -0.26
PBX3-205ENST00000373492 PRAC2D3DTV9 90 aa13.39□□□□□ -0.27
PBX3-205ENST00000373492 AMBPP02760 352 aa13.39□□□□□ -0.27
PBX3-205ENST00000373492 FXYD7P58549 80 aa13.39□□□□□ -0.27
PBX3-205ENST00000373492 SLC35B3Q9H1N7 401 aa13.39□□□□□ -0.27
PBX3-205ENST00000373492 OTORQ9NRC9 128 aa13.39□□□□□ -0.27
PBX3-205ENST00000373492 MAP1LC3B2A6NCE7 125 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 GIG44P09565 113 aaPredicted RBP13.38□□□□□ -0.27
PBX3-205ENST00000373492 PRB4P10163 310 aaPredicted RBP13.38□□□□□ -0.27
PBX3-205ENST00000373492 CMTM2Q8TAZ6 248 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 FAM213BQ8TBF2 198 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 SUN5Q8TC36 379 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 RXFP4Q8TDU9 374 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 RARRES2Q99969 163 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 MAP1LC3BQ9GZQ8 125 aa13.38□□□□□ -0.27
PBX3-205ENST00000373492 PGPA6NDG6 321 aa13.37□□□□□ -0.27
PBX3-205ENST00000373492 RAB5CP51148 216 aa13.37□□□□□ -0.27
PBX3-205ENST00000373492 NKX2-5P52952 324 aaPredicted RBP13.37□□□□□ -0.27
PBX3-205ENST00000373492 FGF8P55075 233 aaPredicted RBP13.37□□□□□ -0.27
PBX3-205ENST00000373492 AMTNQ6UX39 209 aa13.37□□□□□ -0.27
PBX3-205ENST00000373492 NPIPB6E9PJ23 425 aa13.36□□□□□ -0.27
PBX3-205ENST00000373492 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
PBX3-205ENST00000373492 FHITP49789 147 aa13.36□□□□□ -0.27
PBX3-205ENST00000373492 SPINK13Q1W4C9 94 aa13.36□□□□□ -0.27
PBX3-205ENST00000373492 OR11H2Q8NH07 326 aa13.36□□□□□ -0.27
PBX3-205ENST00000373492 PLA2G2EQ9NZK7 142 aa13.36□□□□□ -0.27
PBX3-205ENST00000373492 M0R2Z0 102 aa13.35□□□□□ -0.27
PBX3-205ENST00000373492 TSPOP30536 169 aa13.35□□□□□ -0.27
PBX3-205ENST00000373492 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
PBX3-205ENST00000373492 CSNK1G2-AS1Q8NCQ2 148 aa13.35□□□□□ -0.27
PBX3-205ENST00000373492 LINC00477Q96M19 166 aa13.35□□□□□ -0.27
PBX3-205ENST00000373492 RBAKDNA6NC62 111 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 CDKN1BP46527 198 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 ARL6IP6Q8N6S5 226 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 IL17DQ8TAD2 202 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 MBD3L1Q8WWY6 194 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 TMPRSS5Q9H3S3 457 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 RPH3ALQ9UNE2 315 aa13.34□□□□□ -0.27
PBX3-205ENST00000373492 IGKV2-40A0A087WW87 121 aaPredicted RBP13.33□□□□□ -0.28
PBX3-205ENST00000373492 A0A1W2PRE2 83 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 INSP01308 110 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 IGKV2D-40P01614 121 aaPredicted RBP13.33□□□□□ -0.28
PBX3-205ENST00000373492 SLC25A5P05141 298 aaKnown RBP13.33□□□□□ -0.28
PBX3-205ENST00000373492 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 LEPP41159 167 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 SULT1A2P50226 295 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 ERCC8Q13216 396 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms