RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 MDS2Q8NDY4 140 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 RIF1Q5UIP0 2472 aaKnown RBP7.56□□□□□ -1.2
PTPRT-205ENST00000373193 SIPA1L3O60292 1781 aaPredicted RBP7.56□□□□□ -1.2
PTPRT-205ENST00000373193 HLA-DRB4P13762 266 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 HLA-DRB4X5D2U9 266 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 ID3Q02535 119 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 LCTP09848 1927 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 STPG1Q5TH74 334 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 KLK9Q9UKQ9 250 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 WDR83OSQ9Y284 106 aa7.56□□□□□ -1.2
PTPRT-205ENST00000373193 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 IGKV1-9A0A0C4DH69 117 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 CLPSP04118 112 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 NTF4P34130 210 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 C20orf144Q9BQM9 153 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 A0A0U1RQV1 116 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 KLF2Q9Y5W3 355 aaPredicted RBP7.55□□□□□ -1.2
PTPRT-205ENST00000373193 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 Q86TA4 180 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 IL18BPO95998 194 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 CRYGCP07315 174 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 OR11H6Q8NGC7 330 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 CHCHD2Q9Y6H1 151 aaPredicted RBP7.55□□□□□ -1.2
PTPRT-205ENST00000373193 C17orf100A8MU93 164 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 ZNF561-AS1K7EIQ3 104 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 PRSS22Q9GZN4 317 aa7.55□□□□□ -1.2
PTPRT-205ENST00000373193 SPSB3Q6PJ21 355 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 PRO1854Q9UHT4 67 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 LINC00205P59089 165 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 TRGV9Q99603 122 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 UBR3Q6ZT12 1888 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 RNASE2P10153 161 aaKnown RBP7.54□□□□□ -1.2
PTPRT-205ENST00000373193 NRN1LQ496H8 165 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 NTN5Q8WTR8 489 aaPredicted RBP7.54□□□□□ -1.2
PTPRT-205ENST00000373193 M0R1W7 72 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 SUPT4H1P63272 117 aaKnown RBP7.54□□□□□ -1.2
PTPRT-205ENST00000373193 WBP1Q96G27 269 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 LIME1Q9H400 295 aa7.54□□□□□ -1.2
PTPRT-205ENST00000373193 CEACAM8P31997 349 aaPredicted RBP7.54□□□□□ -1.2
PTPRT-205ENST00000373193 WIPF2Q8TF74 440 aaPredicted RBP7.54□□□□□ -1.2
PTPRT-205ENST00000373193 IGHV1-24A0A0C4DH33 117 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 J3KT08 172 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 IGHV2-70P01814 119 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 VMO1Q7Z5L0 202 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 C14orf132Q9NPU4 83 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 IGKV1-5P01602 117 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 C9orf106Q8NAJ2 232 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 TAL2Q16559 108 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 FAM104BQ5XKR9 115 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 OBSL1O75147 1896 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 PRSS29PA6NIE9 313 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 SH2D6Q7Z4S9 175 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 A0A1B0GX51 115 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 CGB3P0DN86 165 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 COX8AP10176 69 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 KLF5Q13887 457 aaPredicted RBP7.53□□□□□ -1.2
PTPRT-205ENST00000373193 CYYR1Q96J86 154 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 MARF1Q9Y4F3 1742 aaKnown RBP7.53□□□□□ -1.2
PTPRT-205ENST00000373193 LINC00271P0C7V0 271 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 IGLL1P15814 213 aa7.53□□□□□ -1.2
PTPRT-205ENST00000373193 FNDC10F2Z333 226 aa7.52□□□□□ -1.2
PTPRT-205ENST00000373193 K7EMI3 77 aa7.52□□□□□ -1.2
PTPRT-205ENST00000373193 NDUFA12Q9UI09 145 aa7.52□□□□□ -1.2
PTPRT-205ENST00000373193 A0A1B0GWJ7 208 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 C9JQL5 133 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 MST1P26927 711 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
PTPRT-205ENST00000373193 PAQR4Q8N4S7 273 aaPredicted RBP7.52□□□□□ -1.21
PTPRT-205ENST00000373193 BAALC-AS2P0C853 105 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 IGHV2-26A0A0B4J1V2 119 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 F5H768 121 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 CDPF1Q6NVV7 123 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 CGB7P0DN87 165 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 FAM90A1Q86YD7 464 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 C8orf31Q8N9H6 132 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 LHBP01229 141 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 NMSQ5H8A3 153 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 CDKN1BP46527 198 aa7.52□□□□□ -1.21
PTPRT-205ENST00000373193 UCNP55089 124 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 CTHRC1Q96CG8 243 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 FAM236AA0A1B0GUQ0 79 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 FAM236BA0A1B0GV22 79 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
PTPRT-205ENST00000373193 MLANAQ16655 118 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 SMIM10L1P0DMW3 83 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 SMIM10Q96HG1 83 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 MRPL35Q9NZE8 188 aaKnown RBP7.51□□□□□ -1.21
PTPRT-205ENST00000373193 ZNF581Q9P0T4 197 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 POU2AF1Q16633 256 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 THBDP07204 575 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 VWC2Q2TAL6 325 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 TCF20Q9UGU0 1960 aaKnown RBP7.51□□□□□ -1.21
PTPRT-205ENST00000373193 IGKV1-27A0A075B6S5 117 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 SIGLEC8Q9NYZ4 499 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 U3KQE9 123 aa7.51□□□□□ -1.21
PTPRT-205ENST00000373193 SHANK3Q9BYB0 1731 aa7.5□□□□□ -1.21
PTPRT-205ENST00000373193 A0A096LPF7 62 aa7.5□□□□□ -1.21
PTPRT-205ENST00000373193 BRD3OSQ6XYD6 125 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms