RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 FAM222AQ5U5X8 452 aa16.19■□□□□ 0.18
COL9A2-201ENST00000372736 SLC25A2Q9BXI2 301 aa16.19■□□□□ 0.18
COL9A2-201ENST00000372736 KCNIP2Q9NS61 270 aa16.19■□□□□ 0.18
COL9A2-201ENST00000372736 YTHDF2Q9Y5A9 579 aaKnown RBP16.19■□□□□ 0.18
COL9A2-201ENST00000372736 DEFB131BA0A096LNP1 70 aa16.18■□□□□ 0.18
COL9A2-201ENST00000372736 PRM2P04554 102 aa16.18■□□□□ 0.18
COL9A2-201ENST00000372736 PYYP10082 97 aa16.18■□□□□ 0.18
COL9A2-201ENST00000372736 RPL12P30050 165 aaKnown RBP16.18■□□□□ 0.18
COL9A2-201ENST00000372736 FAM167A-AS1Q96KT0 104 aa16.18■□□□□ 0.18
COL9A2-201ENST00000372736 PPP1R14DQ9NXH3 145 aa16.18■□□□□ 0.18
COL9A2-201ENST00000372736 IGHV4-4A0A075B6R2 117 aa16.17■□□□□ 0.18
COL9A2-201ENST00000372736 TEX48A0A1B0GUV7 120 aa16.17■□□□□ 0.18
COL9A2-201ENST00000372736 ZNF705GA8MUZ8 300 aaPredicted RBP16.17■□□□□ 0.18
COL9A2-201ENST00000372736 NDUFB4O95168 129 aa16.17■□□□□ 0.18
COL9A2-201ENST00000372736 MIR17HGQ75NE6 70 aa16.17■□□□□ 0.18
COL9A2-201ENST00000372736 OR10J6PQ8NGY7 276 aa16.17■□□□□ 0.18
COL9A2-201ENST00000372736 KMT2AQ03164 3969 aa16.16■□□□□ 0.18
COL9A2-201ENST00000372736 HIST1H1EP10412 219 aaKnown RBP16.16■□□□□ 0.18
COL9A2-201ENST00000372736 CDKN1BP46527 198 aa16.16■□□□□ 0.18
COL9A2-201ENST00000372736 PDE6HQ13956 83 aa16.16■□□□□ 0.18
COL9A2-201ENST00000372736 SMIM3Q9BZL3 60 aa16.16■□□□□ 0.18
COL9A2-201ENST00000372736 C17orf112F2Z3M2 114 aa16.15■□□□□ 0.18
COL9A2-201ENST00000372736 TMEM256Q8N2U0 113 aa16.15■□□□□ 0.18
COL9A2-201ENST00000372736 RPP25LQ8N5L8 163 aaKnown RBP16.15■□□□□ 0.18
COL9A2-201ENST00000372736 MRPL53Q96EL3 112 aaKnown RBP16.15■□□□□ 0.18
COL9A2-201ENST00000372736 NIPSNAP3BQ9BS92 247 aa16.15■□□□□ 0.18
COL9A2-201ENST00000372736 MRPL32Q9BYC8 188 aaKnown RBP16.15■□□□□ 0.18
COL9A2-201ENST00000372736 PARD6GQ9BYG4 376 aaPredicted RBP16.15■□□□□ 0.18
COL9A2-201ENST00000372736 VPS13DQ5THJ4 4388 aa16.15■□□□□ 0.18
COL9A2-201ENST00000372736 NPIPB6E9PJ23 425 aa16.14■□□□□ 0.17
COL9A2-201ENST00000372736 M0R3E3 92 aa16.14■□□□□ 0.17
COL9A2-201ENST00000372736 TSPOP30536 169 aa16.14■□□□□ 0.17
COL9A2-201ENST00000372736 KIR3DS1Q14943 382 aa16.14■□□□□ 0.17
COL9A2-201ENST00000372736 PLA2G2EQ9NZK7 142 aa16.14■□□□□ 0.17
COL9A2-201ENST00000372736 OXA1LQ15070 435 aa16.13■□□□□ 0.17
COL9A2-201ENST00000372736 FCN2Q15485 313 aa16.13■□□□□ 0.17
COL9A2-201ENST00000372736 BLNKQ8WV28 456 aa16.13■□□□□ 0.17
COL9A2-201ENST00000372736 WFDC1Q9HC57 220 aa16.13■□□□□ 0.17
COL9A2-201ENST00000372736 FUT9Q9Y231 359 aa16.13■□□□□ 0.17
COL9A2-201ENST00000372736 TIMM9Q9Y5J7 89 aa16.13■□□□□ 0.17
COL9A2-201ENST00000372736 PLAC8L1A1L4L8 177 aa16.12■□□□□ 0.17
COL9A2-201ENST00000372736 CT45A10P0DMU9 189 aa16.12■□□□□ 0.17
COL9A2-201ENST00000372736 AZU1P20160 251 aa16.12■□□□□ 0.17
COL9A2-201ENST00000372736 ODF3Q96PU9 254 aa16.12■□□□□ 0.17
COL9A2-201ENST00000372736 LINC01587Q99440 93 aa16.12■□□□□ 0.17
COL9A2-201ENST00000372736 MED28Q9H204 178 aa16.12■□□□□ 0.17
COL9A2-201ENST00000372736 EPPK1P58107 5090 aaKnown RBP16.11■□□□□ 0.17
COL9A2-201ENST00000372736 IFNA5P01569 189 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 TAS2R60P59551 318 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 FFAR4Q5NUL3 377 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 GFI1BQ5VTD9 330 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 EXOC3-AS1Q8N2X6 119 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 FXYD5Q96DB9 178 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 PRELID1Q9Y255 219 aa16.11■□□□□ 0.17
COL9A2-201ENST00000372736 SCGB1C1Q8TD33 95 aa16.1■□□□□ 0.17
COL9A2-201ENST00000372736 C20orf144Q9BQM9 153 aa16.1■□□□□ 0.17
COL9A2-201ENST00000372736 OR51M1Q9H341 326 aa16.1■□□□□ 0.17
COL9A2-201ENST00000372736 LYRM9A8MSI8 78 aa16.09■□□□□ 0.17
COL9A2-201ENST00000372736 OR10J4P0C629 311 aa16.09■□□□□ 0.17
COL9A2-201ENST00000372736 DAD1P61803 113 aa16.09■□□□□ 0.17
COL9A2-201ENST00000372736 ZNF503Q96F45 646 aa16.09■□□□□ 0.17
COL9A2-201ENST00000372736 PAXXQ9BUH6 204 aa16.09■□□□□ 0.17
COL9A2-201ENST00000372736 H7BYZ3 331 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 NBEAP1P0C6P0 100 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 LEPP41159 167 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 ICAM4Q14773 271 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 PHYHIPLQ96FC7 376 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 C16orf74Q96GX8 76 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 NDUFAF3Q9BU61 184 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 AAMDCQ9H7C9 122 aa16.08■□□□□ 0.16
COL9A2-201ENST00000372736 ERCC8Q13216 396 aa16.07■□□□□ 0.16
COL9A2-201ENST00000372736 RNASE8Q8TDE3 154 aaKnown RBP16.07■□□□□ 0.16
COL9A2-201ENST00000372736 RNF141Q8WVD5 230 aa16.07■□□□□ 0.16
COL9A2-201ENST00000372736 J3KRW8 73 aa16.06■□□□□ 0.16
COL9A2-201ENST00000372736 OR7C2O60412 319 aa16.06■□□□□ 0.16
COL9A2-201ENST00000372736 HTN1P15515 57 aa16.06■□□□□ 0.16
COL9A2-201ENST00000372736 HTN3P15516 51 aa16.06■□□□□ 0.16
COL9A2-201ENST00000372736 TMEM263Q8WUH6 116 aaKnown RBP16.06■□□□□ 0.16
COL9A2-201ENST00000372736 FAM210BQ96KR6 192 aa16.06■□□□□ 0.16
COL9A2-201ENST00000372736 IGKV2-40A0A087WW87 121 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-201ENST00000372736 IGKV2D-40P01614 121 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-201ENST00000372736 GIPP09681 153 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-201ENST00000372736 FAM122CQ6P4D5 195 aa16.05■□□□□ 0.16
COL9A2-201ENST00000372736 ZNF493Q6ZR52 646 aa16.05■□□□□ 0.16
COL9A2-201ENST00000372736 FAM19A4Q96LR4 140 aa16.05■□□□□ 0.16
COL9A2-201ENST00000372736 AQP10Q96PS8 301 aa16.05■□□□□ 0.16
COL9A2-201ENST00000372736 AGPAT4-IT1Q9H0P7 198 aa16.05■□□□□ 0.16
COL9A2-201ENST00000372736 UBE2L3P68036 154 aaKnown RBP16.04■□□□□ 0.16
COL9A2-201ENST00000372736 KHDC3LQ587J8 217 aa16.04■□□□□ 0.16
COL9A2-201ENST00000372736 Q5BKY6 102 aa16.04■□□□□ 0.16
COL9A2-201ENST00000372736 C9orf47Q6ZRZ4 202 aa16.04■□□□□ 0.16
COL9A2-201ENST00000372736 DNAH6Q9C0G6 4158 aa16.04■□□□□ 0.16
COL9A2-201ENST00000372736 TRAV12-3A0A0B4J271 114 aa16.03■□□□□ 0.16
COL9A2-201ENST00000372736 KLLNB2CW77 178 aa16.03■□□□□ 0.16
COL9A2-201ENST00000372736 EIF3GO75821 320 aaKnown RBP eCLIP16.03■□□□□ 0.16
COL9A2-201ENST00000372736 RGS21Q2M5E4 152 aa16.03■□□□□ 0.16
COL9A2-201ENST00000372736 ASB13Q8WXK3 278 aa16.03■□□□□ 0.16
COL9A2-201ENST00000372736 LINC00477Q96M19 166 aa16.03■□□□□ 0.16
COL9A2-201ENST00000372736 SLC25A5P05141 298 aaKnown RBP16.02■□□□□ 0.16
COL9A2-201ENST00000372736 DEFB130BP0DP73 79 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms