RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CTSZQ9UBR2 303 aa4.29□□□□□ -1.72
ATG4A-204ENST00000372246 H3BMG7 143 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 NPYP01303 97 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 RAB9AP51151 201 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 ERHP84090 104 aaKnown RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 MRGPRG-AS1Q2M3A8 158 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 LYZL1Q6UWQ5 148 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 PET117Q6UWS5 81 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 ADAMTSL5Q6ZMM2 481 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 NEGR1Q7Z3B1 354 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 ZADH2Q8N4Q0 377 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 ADTRPQ96IZ2 230 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 ZNF714Q96N38 554 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 CITED1Q99966 193 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 C19orf24Q9BVV8 132 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 TMEM133Q9H2Q1 129 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 PRO3102Q9H379 93 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 NGBQ9NPG2 151 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 NHP2Q9NX24 153 aaKnown RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 JKAMPQ9P055 326 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 BDP1A6H8Y1 2624 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 NBASA2RRP1 2371 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 IGKV2-40A0A087WW87 121 aaPredicted RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 A1L4Q6 167 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 SMAD7O15105 426 aaKnown RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 IGKV2D-40P01614 121 aaPredicted RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 ETDBQ3ZM63 59 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 SLC25A48Q6ZT89 311 aaKnown RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 OR1L8Q8NGR8 309 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 MRPL32Q9BYC8 188 aaKnown RBP4.28□□□□□ -1.72
ATG4A-204ENST00000372246 HSPB8Q9UJY1 196 aa4.28□□□□□ -1.72
ATG4A-204ENST00000372246 A0A1B0GUT8 65 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 IGLV2-23P01705 113 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 IGHV1-46P01743 117 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 ARL3P36405 182 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 FAM27E3Q08E93 113 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 RASL11AQ6T310 242 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 SEM1Q6ZVN7 128 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 ATP5L2Q7Z4Y8 100 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 ZGRF1Q86YA3 2104 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 FAM169BQ8N8A8 192 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 OR10X1Q8NGY0 326 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 FANCD2OSQ96PS1 177 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 SRSF8Q9BRL6 282 aaKnown RBP4.27□□□□□ -1.73
ATG4A-204ENST00000372246 NDFIP1Q9BT67 221 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 KLF12Q9Y4X4 402 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 CRYBG3Q68DQ2 2970 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 TRAV26-2A0A0B4J265 109 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 LYNX1G3V0Z9 82 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 H3BRM9 83 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 PRRG2O14669 202 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 NDUFS7O75251 213 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 LHBP01229 141 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 LYNX1P0DP58 116 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 FCER1GP30273 86 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 ID1P41134 155 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 KIR2DS2P43631 304 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF80P51504 273 aaPredicted RBP4.27□□□□□ -1.73
ATG4A-204ENST00000372246 TNFAIP6P98066 277 aaPredicted RBP4.27□□□□□ -1.73
ATG4A-204ENST00000372246 TMEM200BQ69YZ2 307 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 GTF2H5Q6ZYL4 71 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 BOD1L2Q8IYS8 172 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 MAPKAPK5-AS1Q8N8E1 139 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 FDCSPQ8NFU4 85 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 CCL17Q92583 94 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 PRELID3AQ96N28 172 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 SPRY4Q9C004 299 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 ARRDC1-AS1Q9H2J1 176 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 AGRNO00468 2067 aa4.27□□□□□ -1.73
ATG4A-204ENST00000372246 APC2O95996 2303 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 IGHV3OR16-13A0A075B7E8 117 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 IGHV3-74A0A0B4J1X5 117 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 WI2-2373I1.2A0A1W2PRP0 233 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 NPIPB5A8MRT5 1133 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 MRPL51Q4U2R6 128 aaKnown RBP4.26□□□□□ -1.73
ATG4A-204ENST00000372246 CCDC144NLQ6NUI1 221 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF474Q6S9Z5 364 aaPredicted RBP4.26□□□□□ -1.73
ATG4A-204ENST00000372246 PRSS33Q8NF86 280 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 OR5AN1Q8NGI8 311 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF414Q96IQ9 312 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 SLC25A39Q9BZJ4 359 aaPredicted RBP4.26□□□□□ -1.73
ATG4A-204ENST00000372246 MS4A6AQ9H2W1 248 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 FBXL15Q9H469 300 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF71Q9NQZ8 489 aaPredicted RBP4.26□□□□□ -1.73
ATG4A-204ENST00000372246 DKK4Q9UBT3 224 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 ANKRD11Q6UB99 2663 aaPredicted RBP4.26□□□□□ -1.73
ATG4A-204ENST00000372246 MALRD1Q5VYJ5 2156 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 IGHV3-66A0A0C4DH42 116 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 NPIPB6E9PJ23 425 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 GATA3P23771 443 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 ATP5J2P56134 94 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 CKS1BP61024 79 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 POU2AF1Q16633 256 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 C3orf36Q3SXR2 165 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 MBNL2Q5VZF2 373 aaKnown RBP4.26□□□□□ -1.73
ATG4A-204ENST00000372246 ZNF562Q6V9R5 426 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 FMC1Q96HJ9 113 aa4.26□□□□□ -1.73
ATG4A-204ENST00000372246 RAX2Q96IS3 184 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms