RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 MAP1BP46821 2468 aaKnown RBP14.63□□□□□ -0.07
SNX27-202ENST00000368841 IGHV4-4A0A075B6R2 117 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 RS1O15537 224 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 SEC11AP67812 179 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 Q6ZRM9 215 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 GREB1LQ9C091 1923 aaPredicted RBP14.63□□□□□ -0.07
SNX27-202ENST00000368841 NDUFS5O43920 106 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 DLX4Q92988 240 aaPredicted RBP14.63□□□□□ -0.07
SNX27-202ENST00000368841 C1QTNF4Q9BXJ3 329 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 TPSG1Q9NRR2 321 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 MORN5Q5VZ52 161 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 WDR90Q96KV7 1748 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 PRB2P02812 416 aaPredicted RBP14.62□□□□□ -0.07
SNX27-202ENST00000368841 MPZP25189 248 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 ADAMTSL5Q6ZMM2 481 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 CYYR1Q96J86 154 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 SMPXQ9UHP9 88 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 SPRY2O43597 315 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 TRPM7Q96QT4 1865 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 SPINK8P0C7L1 97 aa14.62□□□□□ -0.07
SNX27-202ENST00000368841 TRPT1Q86TN4 253 aaKnown RBP14.61□□□□□ -0.07
SNX27-202ENST00000368841 COX11Q9Y6N1 276 aa14.61□□□□□ -0.07
SNX27-202ENST00000368841 TRBV25-1A0A075B6N4 114 aa14.61□□□□□ -0.07
SNX27-202ENST00000368841 RBMY1FQ15415 496 aaKnown RBP14.61□□□□□ -0.07
SNX27-202ENST00000368841 LHFPL1Q86WI0 220 aa14.61□□□□□ -0.07
SNX27-202ENST00000368841 SBF1O95248 1867 aa14.61□□□□□ -0.07
SNX27-202ENST00000368841 TICRRQ7Z2Z1 1910 aa14.61□□□□□ -0.07
SNX27-202ENST00000368841 DIAPH2-AS1Q14236 149 aa14.6□□□□□ -0.07
SNX27-202ENST00000368841 TMEM14EPQ6UXP3 125 aa14.6□□□□□ -0.07
SNX27-202ENST00000368841 Q6ZQT7 251 aa14.6□□□□□ -0.07
SNX27-202ENST00000368841 LY6G5BQ8NDX9 201 aa14.6□□□□□ -0.07
SNX27-202ENST00000368841 PHF3Q92576 2039 aaKnown RBP14.6□□□□□ -0.07
SNX27-202ENST00000368841 SLC25A16P16260 332 aa14.6□□□□□ -0.07
SNX27-202ENST00000368841 FBLN5Q9UBX5 448 aa14.6□□□□□ -0.07
SNX27-202ENST00000368841 RSPO3Q9BXY4 272 aaPredicted RBP14.59□□□□□ -0.07
SNX27-202ENST00000368841 Q9HAA7 133 aa14.59□□□□□ -0.07
SNX27-202ENST00000368841 TCTEX1D4Q5JR98 221 aa14.59□□□□□ -0.07
SNX27-202ENST00000368841 SHANK2-AS3Q9BTD1 123 aa14.59□□□□□ -0.07
SNX27-202ENST00000368841 LRRK1Q38SD2 2015 aa14.59□□□□□ -0.07
SNX27-202ENST00000368841 CR1LQ2VPA4 569 aa14.58□□□□□ -0.07
SNX27-202ENST00000368841 WIPF3A6NGB9 483 aa14.58□□□□□ -0.08
SNX27-202ENST00000368841 DEFB136Q30KP8 78 aa14.58□□□□□ -0.08
SNX27-202ENST00000368841 SCRT2Q9NQ03 307 aa14.58□□□□□ -0.08
SNX27-202ENST00000368841 IGHV1-69DA0A0B4J2H0 117 aa14.58□□□□□ -0.08
SNX27-202ENST00000368841 IGHV1-69P01742 117 aa14.58□□□□□ -0.08
SNX27-202ENST00000368841 IGKV1OR2-108A0A075B7D4 117 aa14.58□□□□□ -0.08
SNX27-202ENST00000368841 C8orf86Q6ZUL3 223 aa14.57□□□□□ -0.08
SNX27-202ENST00000368841 WISP1O95388 367 aa14.57□□□□□ -0.08
SNX27-202ENST00000368841 PRSS29PA6NIE9 313 aa14.57□□□□□ -0.08
SNX27-202ENST00000368841 PI4KAP42356 2102 aa14.57□□□□□ -0.08
SNX27-202ENST00000368841 TINCRA0A1B0GVN0 87 aa14.56□□□□□ -0.08
SNX27-202ENST00000368841 ANGP03950 147 aaKnown RBP14.56□□□□□ -0.08
SNX27-202ENST00000368841 I3L3M4 83 aa14.56□□□□□ -0.08
SNX27-202ENST00000368841 NDUFS6O75380 124 aaKnown RBP14.56□□□□□ -0.08
SNX27-202ENST00000368841 QRFPP83859 136 aa14.55□□□□□ -0.08
SNX27-202ENST00000368841 ARTNQ5T4W7 220 aa14.55□□□□□ -0.08
SNX27-202ENST00000368841 LTBP1Q14766 1721 aa14.55□□□□□ -0.08
SNX27-202ENST00000368841 MST1LQ2TV78 715 aa14.55□□□□□ -0.08
SNX27-202ENST00000368841 HAMPP81172 84 aa14.55□□□□□ -0.08
SNX27-202ENST00000368841 HEATR1Q9H583 2144 aaKnown RBP14.55□□□□□ -0.08
SNX27-202ENST00000368841 hADV29S1A0JD25 119 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 OOSP1A8MZH6 123 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 SDK2Q58EX2 2172 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 HLA-DRB4P13762 266 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 HLA-DRB4X5D2U9 266 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 KMT2EQ8IZD2 1858 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 VWC2Q2TAL6 325 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 RNF5Q99942 180 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 IGKV2D-24A0A075B6R9 120 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 C1orf194Q5T5A4 169 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 TMEM75Q8N9X5 138 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 ZNF503-AS2A6NEH8 195 aa14.54□□□□□ -0.08
SNX27-202ENST00000368841 ALPK2Q86TB3 2170 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 IGHV2-70DA0A0C4DH43 119 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 HLA-DMBP28068 263 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 DNAJC30Q96LL9 226 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 TRBV24-1A0A075B6N3 115 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 XCL1P47992 114 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 KLF5Q13887 457 aaPredicted RBP14.53□□□□□ -0.08
SNX27-202ENST00000368841 Q6ZS92 163 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 KIAA2026Q5HYC2 2103 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 H3BMM0 161 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 UBE2WQ96B02 151 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 NOP10Q9NPE3 64 aaKnown RBP14.53□□□□□ -0.08
SNX27-202ENST00000368841 F6UB75 175 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 UBE2E1P51965 193 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 TAL2Q16559 108 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 K7ERJ3 54 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 CRLF1O75462 422 aa14.53□□□□□ -0.08
SNX27-202ENST00000368841 IGKV1-6A0A0C4DH72 117 aa14.52□□□□□ -0.08
SNX27-202ENST00000368841 C22orf46C9J442 243 aa14.52□□□□□ -0.08
SNX27-202ENST00000368841 RPL18AQ02543 176 aaKnown RBP14.52□□□□□ -0.09
SNX27-202ENST00000368841 ZNF664Q8N3J9 261 aa14.52□□□□□ -0.09
SNX27-202ENST00000368841 REG4Q9BYZ8 158 aa14.52□□□□□ -0.09
SNX27-202ENST00000368841 CD5LO43866 347 aa14.52□□□□□ -0.09
SNX27-202ENST00000368841 PFN1P07737 140 aaKnown RBP14.52□□□□□ -0.09
SNX27-202ENST00000368841 MRPL51Q4U2R6 128 aaKnown RBP14.52□□□□□ -0.09
SNX27-202ENST00000368841 TMEM243Q9BU79 118 aa14.52□□□□□ -0.09
SNX27-202ENST00000368841 APC2O95996 2303 aa14.52□□□□□ -0.09
SNX27-202ENST00000368841 IGHV1OR15-1A0A075B7D0 117 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms