RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
SMPDL3A-201ENST00000368440 RNF182Q8N6D2 247 aa11.07□□□□□ -0.64
SMPDL3A-201ENST00000368440 KIR2DL5BQ8NHK3 375 aa11.07□□□□□ -0.64
SMPDL3A-201ENST00000368440 GATAD1Q8WUU5 269 aa11.07□□□□□ -0.64
SMPDL3A-201ENST00000368440 C9JQL5 133 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 H3BTX0 84 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 MIR17HGQ75NE6 70 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 BPIFA4PQ86YQ2 179 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 STAB2Q8WWQ8 2551 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 F6UB75 175 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 RHOBP62745 196 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 UQCC3Q6UW78 93 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 RXFP4Q8TDU9 374 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 CSTL1Q9H114 145 aa11.06□□□□□ -0.64
SMPDL3A-201ENST00000368440 TRAV1-1A0A0B4J248 108 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 RBFOX3A6NFN3 312 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 H3BQ15 152 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 ARL14EPLP0DKL9 152 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 IGLC2P0DOY2 106 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 PPT1P50897 306 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 CEBPGP53567 150 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 RNF24Q9Y225 148 aa11.05□□□□□ -0.64
SMPDL3A-201ENST00000368440 H3BMM0 161 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 SLC17A3O00476 420 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 UBE2CO00762 179 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 CA1P00915 261 aaPredicted RBP11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 GIG44P09565 113 aaPredicted RBP11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 HLA-DRB4P13762 266 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 PEA15Q15121 130 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 SAMD13Q5VXD3 122 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 Q6ZWC4 215 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 SAV1Q9H4B6 383 aaPredicted RBP11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 HLA-DRB4X5D2U9 266 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 SFTA3P0C7M3 94 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 PYYP10082 97 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 UBE2G2P60604 165 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
SMPDL3A-201ENST00000368440 TMEM218A2RU14 115 aa11.03□□□□□ -0.64
SMPDL3A-201ENST00000368440 IGKV3-20P01619 116 aa11.03□□□□□ -0.64
SMPDL3A-201ENST00000368440 FOXI2Q6ZQN5 318 aa11.03□□□□□ -0.64
SMPDL3A-201ENST00000368440 FAM167A-AS1Q96KT0 104 aa11.03□□□□□ -0.64
SMPDL3A-201ENST00000368440 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
SMPDL3A-201ENST00000368440 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
SMPDL3A-201ENST00000368440 F8W036 122 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 SPRY2O43597 315 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 OR7C2O60412 319 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 STAG3L2P0CL84 134 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 STAG3L3P0CL85 134 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 ICAM4Q14773 271 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 RNF183Q96D59 192 aa11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 ZNF331Q9NQX6 463 aaPredicted RBP11.02□□□□□ -0.64
SMPDL3A-201ENST00000368440 A0A0J9YX75 114 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 LOC102723971A0A1B0GUV8 181 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 KRBOX1C9JBD0 128 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 CXorf1O96002 111 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 APOC3P02656 99 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 OR10J4P0C629 311 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 ZNF705DP0CH99 300 aaPredicted RBP11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 ZNF705BP0CI00 300 aaPredicted RBP11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 BCL2P10415 239 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 ADCYAP1P18509 176 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 MRPL32Q9BYC8 188 aaKnown RBP11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 EDA2RQ9HAV5 297 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 TP53TG1Q9Y2A0 90 aa11.02□□□□□ -0.65
SMPDL3A-201ENST00000368440 PAGE4O60829 102 aa11.01□□□□□ -0.65
SMPDL3A-201ENST00000368440 IFNA1P01562 189 aa11.01□□□□□ -0.65
SMPDL3A-201ENST00000368440 MORN3Q6PF18 240 aaPredicted RBP11.01□□□□□ -0.65
SMPDL3A-201ENST00000368440 ZNF738Q8NE65 137 aa11.01□□□□□ -0.65
SMPDL3A-201ENST00000368440 OR4B1Q8NGF8 309 aa11.01□□□□□ -0.65
SMPDL3A-201ENST00000368440 GCHFRP30047 84 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 FXYD7P58549 80 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 PSG3Q16557 428 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 ZNF506Q5JVG8 444 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 EBLN2Q6P2I7 272 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 SLC50A1Q9BRV3 221 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 CLEC5AQ9NY25 188 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 CST9LP1Q5W188 147 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 ZNF503Q96F45 646 aa11□□□□□ -0.65
SMPDL3A-201ENST00000368440 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 ZNF705FA8MVS1 300 aaPredicted RBP10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 NDUFB4O95168 129 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 HIST1H1EP10412 219 aaKnown RBP10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 TAS2R45P59539 299 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 KHDC3LQ587J8 217 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 BLNKQ8WV28 456 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 SLC35B3Q9H1N7 401 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 VAX2Q9UIW0 290 aa10.99□□□□□ -0.65
SMPDL3A-201ENST00000368440 A8MTW9 85 aa10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 SCO1O75880 301 aa10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 CNN1P51911 297 aaKnown RBP10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 CYB561D1Q8N8Q1 229 aa10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 CSNK1G2-AS1Q8NCQ2 148 aa10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 FXYD5Q96DB9 178 aa10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 OR51M1Q9H341 326 aa10.98□□□□□ -0.65
SMPDL3A-201ENST00000368440 MANBALQ9NQG1 85 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms