RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 IGHV3-66A0A0C4DH42 116 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 A0A0G2JLM5 398 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 BUB1B-PAK6H3BSN5 160 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 SH2D1AO60880 128 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 IGLV2-11P01706 119 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 NUP37Q8NFH4 326 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 FAM57AQ8TBR7 257 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 SPCS1Q9Y6A9 102 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 LRBAP50851 2863 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 K7EMI3 77 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 SEC11AP67812 179 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 PIP4P1Q86T03 277 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 OR2K2Q8NGT1 345 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 SHANK2-AS3Q9BTD1 123 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
CD46-208ENST00000367042 TEX22C9J3V5 150 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 J3KRW8 73 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 CRIP1P50238 77 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 SIGLEC15Q6ZMC9 328 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 C2orf91Q6ZV80 131 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 LINC00311Q8N616 119 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 UFC1Q9Y3C8 167 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 CUL9Q8IWT3 2517 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 IGHV3-49A0A0A0MS15 119 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 ZNF785A8K8V0 405 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 NPIPB6E9PJ23 425 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 NPYP01303 97 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 HLA-DMBP28068 263 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 RBPJQ06330 500 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 KLRD1Q13241 179 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 MRPL51Q4U2R6 128 aaKnown RBP6.46□□□□□ -1.38
CD46-208ENST00000367042 FAM71F2Q6NXP2 309 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 ZNF491Q8N8L2 437 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 FER1L6-AS1Q8NA97 138 aa6.46□□□□□ -1.38
CD46-208ENST00000367042 I3L2K1 104 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 SMAD7O15105 426 aaKnown RBP6.45□□□□□ -1.38
CD46-208ENST00000367042 PLP1P60201 277 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 FAM104BQ5XKR9 115 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 C1RLQ9NZP8 487 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 MSRB1Q9NZV6 116 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 FABP2P12104 132 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 LEPP41159 167 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 MRGPRG-AS1Q2M3A8 158 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 S100A7AQ86SG5 101 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 LINC01560Q8TB33 94 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 SVEP1Q4LDE5 3571 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 FAM90A27PA6NNH2 459 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 E7EQL1 145 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 K7EIM0 57 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 Q6AWC8 147 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 Q6ZS92 163 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 MAP1LC3AQ9H492 121 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 TMEM160Q9NX00 188 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 TMEM14CQ9P0S9 112 aa6.45□□□□□ -1.38
CD46-208ENST00000367042 ZNF292O60281 2723 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 RELNP78509 3460 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 C9orf118A6NHY6 69 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 H3BRN7 92 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 THBDP07204 575 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 MFAP4P55083 255 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 HSD52Q0P140 79 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 GTSCR1Q86UQ5 136 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 JMJD8Q96S16 334 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 FOXC2Q99958 501 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 COL25A1Q9BXS0 654 aaPredicted RBP6.44□□□□□ -1.38
CD46-208ENST00000367042 A0A1B0GW15 77 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 K7ERJ3 54 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 CD3EP07766 207 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 EGR2P11161 476 aaPredicted RBP6.44□□□□□ -1.38
CD46-208ENST00000367042 PVRIGQ6DKI7 326 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 VGLL1Q99990 258 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 KLK15Q9H2R5 256 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 HIF1ANQ9NWT6 349 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 NHP2Q9NX24 153 aaKnown RBP6.44□□□□□ -1.38
CD46-208ENST00000367042 JKAMPQ9P055 326 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 AKAP13Q12802 2813 aa6.44□□□□□ -1.38
CD46-208ENST00000367042 NBR2O15453 112 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 PPBPP02775 128 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 GATA1P15976 413 aaPredicted RBP6.43□□□□□ -1.38
CD46-208ENST00000367042 ERCC8Q13216 396 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 ABHD17AQ96GS6 310 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 ZNF207O43670 478 aaKnown RBP6.43□□□□□ -1.38
CD46-208ENST00000367042 DLX6P56179 175 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 ECSCRQ19T08 205 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 C3orf36Q3SXR2 165 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 C21orf62Q9NYP8 219 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.43□□□□□ -1.38
CD46-208ENST00000367042 H3BRM9 83 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 IGLV1-47P01700 117 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
CD46-208ENST00000367042 BMI1P35226 326 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 LGALS9BQ3B8N2 356 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 LGALS9CQ6DKI2 356 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 CSTL1Q9H114 145 aa6.43□□□□□ -1.38
CD46-208ENST00000367042 A0A096LNJ9 63 aa6.42□□□□□ -1.38
CD46-208ENST00000367042 NDUFS7O75251 213 aa6.42□□□□□ -1.38
CD46-208ENST00000367042 GAS8-AS1O95177 125 aa6.42□□□□□ -1.38
CD46-208ENST00000367042 APOBEC3AP31941 199 aaPredicted RBP6.42□□□□□ -1.38
CD46-208ENST00000367042 PRR30Q53SZ7 412 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms