RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ATRAIDQ6UW56 229 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 TEX43Q6ZNM6 134 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 PRO3102Q9H379 93 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 PFN1P07737 140 aaKnown RBP3.89□□□□□ -1.79
SCN3A-202ENST00000360093 PPIFP30405 207 aaKnown RBP3.89□□□□□ -1.79
SCN3A-202ENST00000360093 TRPT1Q86TN4 253 aaKnown RBP3.89□□□□□ -1.79
SCN3A-202ENST00000360093 VPREB3Q9UKI3 123 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 TRBV19A0A075B6N1 114 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 A0A1B0GUS0 222 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 EVI2AP22794 236 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 CKS1BP61024 79 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 TMEM249Q2WGJ8 235 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 ZNF876PQ49A33 203 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 C14orf144Q96I85 54 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 ALPK3Q96L96 1907 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 COLCA2A8K830 154 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 H3BRN7 92 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 WISP1O95388 367 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 APOMO95445 188 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 LINC00205P59089 165 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 C5orf30Q96GV9 206 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 ATP6V0BQ99437 205 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 TSSC4Q9Y5U2 329 aaPredicted RBP3.89□□□□□ -1.79
SCN3A-202ENST00000360093 HOXB4P17483 251 aaPredicted RBP3.89□□□□□ -1.79
SCN3A-202ENST00000360093 PAX9P55771 341 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 LIME1Q9H400 295 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 PRSS46E5RG02 174 aa3.89□□□□□ -1.79
SCN3A-202ENST00000360093 CA1P00915 261 aaPredicted RBP3.89□□□□□ -1.79
SCN3A-202ENST00000360093 ERCC8Q13216 396 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 FAM231DQ6ZW35 169 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 C11orf53Q8IXP5 236 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 LINC00469Q8N7U9 141 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 ZNF114Q8NC26 417 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 NPBQ8NG41 125 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 RNASE1P07998 156 aaKnown RBP3.88□□□□□ -1.79
SCN3A-202ENST00000360093 C5orf24Q7Z6I8 188 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 UBE2DNLQ8IWF7 75 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 RASL10AQ92737 203 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 LENEPQ9Y5L5 61 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-202ENST00000360093 K7EM74 188 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 GZMBP10144 247 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 WT1P19544 449 aaPredicted RBP3.88□□□□□ -1.79
SCN3A-202ENST00000360093 SLAQ13239 276 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 ARHGAP21Q5T5U3 1957 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
SCN3A-202ENST00000360093 CDKN1BP46527 198 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 ZNF134P52741 427 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 DEFB131AP59861 70 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 MRPL53Q96EL3 112 aaKnown RBP3.88□□□□□ -1.79
SCN3A-202ENST00000360093 DERL1Q9BUN8 251 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 RBAKDNA6NC62 111 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 HSD52Q0P140 79 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 TCTEX1D4Q5JR98 221 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 C8orf86Q6ZUL3 223 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 OR2K2Q8NGT1 345 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 NACAE9PAV3 2078 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 PCNX3Q9H6A9 2034 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 ARFGEF3Q5TH69 2177 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 WT1-ASQ06250 92 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 OVOL2Q9BRP0 275 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 SS18Q15532 418 aa3.88□□□□□ -1.79
SCN3A-202ENST00000360093 ZNF815PA8K554 130 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 HOXA3O43365 443 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-202ENST00000360093 CXCL1P09341 107 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 FOXE3Q13461 319 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 DEFB121Q5J5C9 76 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 MUC22E2RYF6 1773 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-202ENST00000360093 TTC32Q5I0X7 151 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 ARL6IP6Q8N6S5 226 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 RNF152Q8N8N0 203 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 CSTL1Q9H114 145 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 IGHV7-4-1A0A0J9YVY3 117 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 ARMS2P0C7Q2 107 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 IGLC1P0CG04 106 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 MLANAQ16655 118 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 MST1LQ2TV78 715 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 HIST3H2BBQ8N257 126 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 TMEM141Q96I45 108 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 ZNRD1Q9P1U0 126 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 TRAV8-1A0A0A6YYK1 113 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 Q8TAT8 98 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 SPXQ9BT56 116 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 NDUFAF3Q9BU61 184 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 GSN-AS1Q9NRJ2 163 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 IGKV1-39P01597 117 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 IGKV1D-39P04432 117 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 Q0VG73 95 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 IGFBPL1Q8WX77 278 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 G3V318 75 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 K7EMI3 77 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 TDGF1P3P51864 188 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 VWC2Q2TAL6 325 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 DUX4L9Q6RFH8 374 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-202ENST00000360093 MRPL52Q86TS9 123 aaKnown RBP3.87□□□□□ -1.79
SCN3A-202ENST00000360093 PTPRSQ13332 1948 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 IGHV1OR15-1A0A075B7D0 117 aa3.87□□□□□ -1.79
SCN3A-202ENST00000360093 C14orf178Q8N769 122 aaPredicted RBP3.87□□□□□ -1.79
SCN3A-202ENST00000360093 PRR25Q96S07 402 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms