RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 GAGE7O76087 117 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 IGHG4P01861 327 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 GAGE12FP0CL80 117 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 GAGE12GP0CL81 117 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 GAGE12IP0CL82 117 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 CARD19Q96LW7 228 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 DSCR9P59020 149 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 M0R1W7 72 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 Q0VFX4 171 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 Q0VG73 95 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 ZNF318Q5VUA4 2279 aa12.93□□□□□ -0.34
COL18A1-203ENST00000359759 B4DSR2 109 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 PRSS46E5RG02 174 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 DAD1P61803 113 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 CFHR1Q03591 330 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 A0A1W2PPI3 338 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 ZNRF2Q8NHG8 242 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 GREB1Q4ZG55 1949 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 Q6ZWC4 215 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 RNF5Q99942 180 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 H3BMG7 143 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 K7EP34 96 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 QRFPP83859 136 aa12.92□□□□□ -0.34
COL18A1-203ENST00000359759 RNF166Q96A37 237 aaPredicted RBP12.92□□□□□ -0.34
COL18A1-203ENST00000359759 K7EP13 123 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 IGLV3-19P01714 112 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 ATP6V0E1O15342 81 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 TAL2Q16559 108 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 FAM104BQ5XKR9 115 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 BPESC1Q9GZL8 116 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 TRBV20-1A0A075B6N2 111 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 KLF5Q13887 457 aaPredicted RBP12.91□□□□□ -0.34
COL18A1-203ENST00000359759 KIF26BQ2KJY2 2108 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 LOC285556D6RIA3 1793 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 F8W1H4 67 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 HLA-DRB4P13762 266 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 HLA-DRB4X5D2U9 266 aa12.91□□□□□ -0.34
COL18A1-203ENST00000359759 PFN1P07737 140 aaKnown RBP12.91□□□□□ -0.34
COL18A1-203ENST00000359759 ZFP36L1Q07352 338 aaKnown RBP12.91□□□□□ -0.34
COL18A1-203ENST00000359759 CGB7P0DN87 165 aa12.9□□□□□ -0.34
COL18A1-203ENST00000359759 TAF1LQ8IZX4 1826 aa12.9□□□□□ -0.34
COL18A1-203ENST00000359759 CLPSP04118 112 aa12.9□□□□□ -0.34
COL18A1-203ENST00000359759 MST1LQ2TV78 715 aa12.9□□□□□ -0.34
COL18A1-203ENST00000359759 SS18L2Q9UHA2 77 aa12.9□□□□□ -0.34
COL18A1-203ENST00000359759 LYL1P12980 280 aa12.9□□□□□ -0.34
COL18A1-203ENST00000359759 RBM3P98179 157 aaKnown RBP12.9□□□□□ -0.34
COL18A1-203ENST00000359759 UTF1Q5T230 341 aa12.9□□□□□ -0.35
COL18A1-203ENST00000359759 A0A1W2PPM0 123 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 BVES-AS1Q5T3Y7 98 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
COL18A1-203ENST00000359759 PRSS29PA6NIE9 313 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 CRYBA4P53673 196 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 CACNA1IQ9P0X4 2223 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 SEC16AO15027 2179 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 TEX36Q5VZQ5 186 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 NDUFA12Q9UI09 145 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
COL18A1-203ENST00000359759 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 NDUFB8O95169 186 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 IGLC2P0DOY2 106 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 IGLC3P0DOY3 106 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 IGLL1P15814 213 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 GATA4P43694 442 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 IGHV4-4A0A075B6R2 117 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 CRYGCP07315 174 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 TMEM190Q8WZ59 177 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 SDHAF1A6NFY7 115 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 TMEM243Q9BU79 118 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 AMTNQ6UX39 209 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 WNK3Q9BYP7 1800 aa12.88□□□□□ -0.35
COL18A1-203ENST00000359759 FREM3P0C091 2139 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 LRRK1Q38SD2 2015 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 G3V318 75 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 LHBP01229 141 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 IGKV1-39P01597 117 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 IGKV1D-39P04432 117 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 ANKRD29Q8N6D5 301 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 MRPL35Q9NZE8 188 aaKnown RBP12.87□□□□□ -0.35
COL18A1-203ENST00000359759 ZNF492Q9P255 531 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 VWC2Q2TAL6 325 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 LINC01356Q8N9X3 169 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 MBD3L4A6NDZ8 208 aaPredicted RBP12.87□□□□□ -0.35
COL18A1-203ENST00000359759 MBD3L3A6NE82 208 aaPredicted RBP12.87□□□□□ -0.35
COL18A1-203ENST00000359759 MBD3L5A6NJ08 208 aaPredicted RBP12.87□□□□□ -0.35
COL18A1-203ENST00000359759 COX8AP10176 69 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 MBD3L2Q8NHZ7 208 aaPredicted RBP12.87□□□□□ -0.35
COL18A1-203ENST00000359759 SIGLEC8Q9NYZ4 499 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 CABIN1Q9Y6J0 2220 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 BRCA1P38398 1863 aaKnown RBP12.87□□□□□ -0.35
COL18A1-203ENST00000359759 PRO1854Q9UHT4 67 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 TRIOBPQ9H2D6 2365 aa12.87□□□□□ -0.35
COL18A1-203ENST00000359759 CT83Q5H943 113 aa12.86□□□□□ -0.35
COL18A1-203ENST00000359759 FANCMQ8IYD8 2048 aa12.86□□□□□ -0.35
COL18A1-203ENST00000359759 LINC01619G3V211 115 aa12.86□□□□□ -0.35
COL18A1-203ENST00000359759 C8orf86Q6ZUL3 223 aa12.86□□□□□ -0.35
COL18A1-203ENST00000359759 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
COL18A1-203ENST00000359759 RALGAPA2Q2PPJ7 1873 aa12.86□□□□□ -0.35
COL18A1-203ENST00000359759 FER1L5A0AVI2 2057 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms