RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 OR4C13Q8NGP0 309 aa11.83□□□□□ -0.52
UBAP1-202ENST00000359544 TPPP3Q9BW30 176 aa11.83□□□□□ -0.52
UBAP1-202ENST00000359544 TNCP24821 2201 aa11.83□□□□□ -0.52
UBAP1-202ENST00000359544 MTURNQ8N3F0 131 aa11.83□□□□□ -0.52
UBAP1-202ENST00000359544 MRAP2Q96G30 205 aa11.83□□□□□ -0.52
UBAP1-202ENST00000359544 TM2D2Q9BX73 214 aa11.83□□□□□ -0.52
UBAP1-202ENST00000359544 TANC2Q9HCD6 1990 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 HIVEP3Q5T1R4 2406 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 WFDC2Q14508 124 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 C10orf55Q5SWW7 151 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 HECTD1Q9ULT8 2610 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 SLC25A17O43808 307 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 CEND1Q8N111 149 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 ZNF502Q8TBZ5 544 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 NHP2Q9NX24 153 aaKnown RBP11.82□□□□□ -0.52
UBAP1-202ENST00000359544 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 DKK2Q9UBU2 259 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 POLEQ07864 2286 aa11.82□□□□□ -0.52
UBAP1-202ENST00000359544 DSCAML1Q8TD84 2053 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 IGHV1-18A0A0C4DH31 117 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 ZNF785A8K8V0 405 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 VSTM5A8MXK1 200 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 K7ERJ3 54 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 SPAG8Q99932 426 aaPredicted RBP11.81□□□□□ -0.52
UBAP1-202ENST00000359544 HLA-DRB4P13762 266 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 CNEP1R1Q8N9A8 125 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 HLA-DRB4X5D2U9 266 aa11.81□□□□□ -0.52
UBAP1-202ENST00000359544 A0A1W2PPI3 338 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 IGLL5B9A064 214 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 LINC01559Q495D7 138 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 PVRIGQ6DKI7 326 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 DUX4L9Q6RFH8 374 aaPredicted RBP11.8□□□□□ -0.52
UBAP1-202ENST00000359544 AMN1Q8IY45 258 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 ZNF479Q96JC4 524 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 GAFA1Q96PS6 74 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 PSG8Q9UQ74 426 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 TNFRSF1AP19438 455 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 VMA21Q3ZAQ7 101 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 MRPL51Q4U2R6 128 aaKnown RBP11.8□□□□□ -0.52
UBAP1-202ENST00000359544 FAM201AQ5SY85 155 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 ZMAT4Q9H898 229 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 RNF7Q9UBF6 113 aa11.8□□□□□ -0.52
UBAP1-202ENST00000359544 THBDP07204 575 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 FXYD7P58549 80 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 SPRNQ5BIV9 151 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 TRBV25-1A0A075B6N4 114 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 WI2-2373I1.2A0A1W2PRP0 233 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 TAL2Q16559 108 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 LYZL1Q6UWQ5 148 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 ZNF48Q96MX3 618 aaPredicted RBP11.79□□□□□ -0.52
UBAP1-202ENST00000359544 SLC25A39Q9BZJ4 359 aaPredicted RBP11.79□□□□□ -0.52
UBAP1-202ENST00000359544 LINC00312Q9Y6C7 94 aa11.79□□□□□ -0.52
UBAP1-202ENST00000359544 FLNBO75369 2602 aaKnown RBP11.78□□□□□ -0.52
UBAP1-202ENST00000359544 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.78□□□□□ -0.52
UBAP1-202ENST00000359544 SPRY3O43610 288 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 EVI2AP22794 236 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 CKS2P33552 79 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 LYZP61626 148 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 ETDBQ3ZM63 59 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 GAGE13Q4V321 117 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 Q71RC1 249 aaPredicted RBP11.78□□□□□ -0.52
UBAP1-202ENST00000359544 LYPD1Q8N2G4 141 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 ADGRG4Q8IZF6 3080 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 IGKV2D-26A0A0A0MRZ7 120 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 TMEM213A2RRL7 107 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 IGLV2-23P01705 113 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 IGKCP01834 107 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 GATA4P43694 442 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 ARPC1AQ92747 370 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 RITA1Q96K30 269 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 CCL13Q99616 98 aa11.78□□□□□ -0.52
UBAP1-202ENST00000359544 MRPL16Q9NX20 251 aaKnown RBP11.78□□□□□ -0.52
UBAP1-202ENST00000359544 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.52
UBAP1-202ENST00000359544 CRYBA4P53673 196 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 ODF1Q14990 250 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 HCP5Q6MZN7 132 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 SH2D6Q7Z4S9 175 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 WFDC12Q8WWY7 111 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 HHLA3Q9XRX5 114 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 DOPEY2Q9Y3R5 2298 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 SETXQ7Z333 2677 aaKnown RBP11.77□□□□□ -0.53
UBAP1-202ENST00000359544 H3BMG7 143 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 CRIP1P50238 77 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 MSMPQ1L6U9 139 aa11.77□□□□□ -0.53
UBAP1-202ENST00000359544 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.53
UBAP1-202ENST00000359544 PCNX1Q96RV3 2341 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 USP9YO00507 2555 aaPredicted RBP11.76□□□□□ -0.53
UBAP1-202ENST00000359544 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 NPYP01303 97 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 KLF17Q5JT82 389 aaPredicted RBP11.76□□□□□ -0.53
UBAP1-202ENST00000359544 ZNF562Q6V9R5 426 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 FAM169BQ8N8A8 192 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 MAP1LC3AQ9H492 121 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 CRYBG3Q68DQ2 2970 aa11.76□□□□□ -0.53
UBAP1-202ENST00000359544 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms