RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LGALS9CQ6DKI2 356 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 PPP1R32Q7Z5V6 425 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 DEFB125Q8N687 156 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 PRR31Q5SQ13 230 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 STPG1Q5TH74 334 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 C3orf36Q3SXR2 165 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 STHQ8IWL8 128 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 ZIC4Q8N9L1 334 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 GATD1Q8NB37 220 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 C1orf43Q9BWL3 253 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 TMEM133Q9H2Q1 129 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 MBNL3Q9NUK0 354 aaKnown RBP7.18□□□□□ -1.26
COL6A6-201ENST00000358511 VDAC2P45880 294 aaPredicted RBP7.18□□□□□ -1.26
COL6A6-201ENST00000358511 TAL2Q16559 108 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 SS18L2Q9UHA2 77 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 K7ERJ3 54 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 FAM231DQ6ZW35 169 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 PRB3Q04118 309 aaPredicted RBP7.18□□□□□ -1.26
COL6A6-201ENST00000358511 SVIPQ8NHG7 77 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 RCHY1Q96PM5 261 aa7.18□□□□□ -1.26
COL6A6-201ENST00000358511 IGHG4P01861 327 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 HLA-DMBP28068 263 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 TRGV11A0A075B6L2 103 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 IGLC7A0M8Q6 106 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 CFHR2P36980 270 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 SP7Q8TDD2 431 aaPredicted RBP7.17□□□□□ -1.26
COL6A6-201ENST00000358511 RNASE8Q8TDE3 154 aaKnown RBP7.17□□□□□ -1.26
COL6A6-201ENST00000358511 IMMP1LQ96LU5 166 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 PRB4P10163 310 aaPredicted RBP7.17□□□□□ -1.26
COL6A6-201ENST00000358511 MYOD1P15172 320 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 TRGV4A0A0C4DH28 118 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 LINC00473A8K010 186 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 ARMS2P0C7Q2 107 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 FGFBP3Q8TAT2 258 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 OVOL1O14753 267 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 TMEM167AQ8TBQ9 72 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 B5MCH6 92 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 SMKR1H3BMG3 65 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 FOXF2Q12947 444 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 POU2AF1Q16633 256 aa7.17□□□□□ -1.26
COL6A6-201ENST00000358511 Q6ZRM9 215 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 FLVCR1-AS1Q8TAF5 88 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 IL18BPO95998 194 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 TECTAO75443 2155 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 IGHV1-2P23083 117 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 UTF1Q5T230 341 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 UNQ6494/PRO21346Q6UXR6 183 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 TMEM14BQ9NUH8 114 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 TET2Q6N021 2002 aaPredicted RBP7.16□□□□□ -1.26
COL6A6-201ENST00000358511 BSPH1Q075Z2 132 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 WIPF2Q8TF74 440 aaPredicted RBP7.16□□□□□ -1.26
COL6A6-201ENST00000358511 LINC00479Q96M42 142 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 PRSS46E5RG02 174 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 DOPEY1Q5JWR5 2465 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 LOC102723996A0A087X1L8 192 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 A0A0G2JRQ6 117 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 TCF15Q12870 199 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 PMVKQ15126 192 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 FAM104BQ5XKR9 115 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 SAP25Q8TEE9 199 aa7.16□□□□□ -1.26
COL6A6-201ENST00000358511 DSCAMO60469 2012 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 IGLV3-12A0A075B6K2 115 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 TRAV3A0A0B4J244 114 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 RPL15P61313 204 aaKnown RBP7.15□□□□□ -1.26
COL6A6-201ENST00000358511 ZNF726P1Q15940 193 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 GLMPQ8WWB7 406 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 SONP18583 2426 aaKnown RBP7.15□□□□□ -1.26
COL6A6-201ENST00000358511 NDUFC2O95298 119 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 FAM201AQ5SY85 155 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 SRRM5B3KS81 715 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 APOBEC3AP31941 199 aaPredicted RBP7.15□□□□□ -1.26
COL6A6-201ENST00000358511 LINC00158P58513 81 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 VOPP1Q96AW1 172 aa7.15□□□□□ -1.26
COL6A6-201ENST00000358511 FGF6P10767 208 aa7.15□□□□□ -1.27
COL6A6-201ENST00000358511 CELA3AP09093 270 aa7.15□□□□□ -1.27
COL6A6-201ENST00000358511 A0A0U1RRA0 63 aa7.15□□□□□ -1.27
COL6A6-201ENST00000358511 MRPL14Q6P1L8 145 aaKnown RBP7.15□□□□□ -1.27
COL6A6-201ENST00000358511 A0A087WX48 190 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 TEX48A0A1B0GUV7 120 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 PAX4O43316 350 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 KLF5Q13887 457 aaPredicted RBP7.14□□□□□ -1.27
COL6A6-201ENST00000358511 C3orf56Q8N813 242 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 Q8TAT8 98 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 TMEM141Q96I45 108 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 C20orf204Q6ZNR8 217 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 CCL3L1P16619 93 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 C15orf32Q32M92 178 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 C11orf44Q8N8P7 122 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 C17orf100A8MU93 164 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 PSPNO60542 156 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 Q6P435 159 aa7.14□□□□□ -1.27
COL6A6-201ENST00000358511 SPACA3Q8IXA5 215 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 C14orf178Q8N769 122 aaPredicted RBP7.13□□□□□ -1.27
COL6A6-201ENST00000358511 CHCHD5Q9BSY4 110 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 hADV29S1A0JD25 119 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 Q8N8P6 123 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 C22orf46C9J442 243 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 H0YJW9 148 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms