RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CD40P25942 277 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 NDUFA11Q86Y39 141 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 MSRB2Q9Y3D2 182 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 FREM1Q5H8C1 2179 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 TRBV19A0A075B6N1 114 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 IGKV1D-17A0A075B6S4 117 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 TNFRSF6BO95407 300 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 P0DMU3 169 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 FAM231AP0DMU4 169 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 FAM231CP0DMU5 169 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 PDE6HQ13956 83 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 EDDM3AQ14507 147 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 ALKBH6Q3KRA9 238 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 ZFP2Q6ZN57 461 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 ZNF826PQ6ZT77 177 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 ZNF833PQ6ZTB9 187 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 PPDPFQ9H3Y8 114 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 PROCRQ9UNN8 238 aa6.04□□□□□ -1.44
CCR9-201ENST00000355983 IGHV1OR15-9A0A0B4J2B8 117 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 LOC107984156A0A0G2JMH3 177 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 K7EMI3 77 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 SLC25A20O43772 301 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 PLAUP00749 431 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 CFIP05156 583 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 SLC25A16P16260 332 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 FXYD7P58549 80 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
CCR9-201ENST00000355983 WT1-ASQ06250 92 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 HES1Q14469 280 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 ARL17AQ8IVW1 177 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 KLF14Q8TD94 323 aaPredicted RBP6.03□□□□□ -1.44
CCR9-201ENST00000355983 ODF3Q96PU9 254 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 SCNM1Q9BWG6 230 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 MRPL20Q9BYC9 149 aaKnown RBP6.03□□□□□ -1.44
CCR9-201ENST00000355983 IMUPQ9GZP8 106 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 F5P12259 2224 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 TRAV25A0A0B4J276 109 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 CGB1A6NKQ9 187 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 TM4SF5O14894 197 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 DUSP14O95147 198 aaKnown RBP6.03□□□□□ -1.44
CCR9-201ENST00000355983 HLA-DMBP28068 263 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 SIGLEC15Q6ZMC9 328 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 C10orf126Q8N4M7 172 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 PSMG3-AS1Q96PY0 264 aa6.03□□□□□ -1.44
CCR9-201ENST00000355983 IGHV3OR15-7A0A075B7D8 119 aa6.02□□□□□ -1.44
CCR9-201ENST00000355983 TRAV8-2A0A0B4J237 113 aa6.02□□□□□ -1.44
CCR9-201ENST00000355983 M0R2P5 195 aa6.02□□□□□ -1.44
CCR9-201ENST00000355983 ATP5G1P05496 136 aa6.02□□□□□ -1.44
CCR9-201ENST00000355983 LAGE3Q14657 143 aa6.02□□□□□ -1.44
CCR9-201ENST00000355983 MRPL36Q9P0J6 103 aaKnown RBP6.02□□□□□ -1.44
CCR9-201ENST00000355983 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 SH2D1AO60880 128 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 CRLF1O75462 422 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 IGKV1-16P04430 117 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 COX6B1P14854 86 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 IL11RAQ14626 422 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 AAMDCQ9H7C9 122 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 FZR1Q9UM11 496 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 BRWD1Q9NSI6 2320 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 TNCP24821 2201 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 TRAV8-4A0A0B4J246 113 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 SMIM9A6NGZ8 99 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 DEFB121Q5J5C9 76 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 MBNL2Q5VZF2 373 aaKnown RBP6.02□□□□□ -1.45
CCR9-201ENST00000355983 WFDC3Q8IUB2 231 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 FAM173AQ9BQD7 235 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 NGBQ9NPG2 151 aa6.02□□□□□ -1.45
CCR9-201ENST00000355983 RPUSD1Q9UJJ7 312 aaKnown RBP6.02□□□□□ -1.45
CCR9-201ENST00000355983 PCNX2A6NKB5 2137 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 SMKR1H3BMG3 65 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 CCL5P13501 91 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 TMEM240Q5SV17 173 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 IL17RELQ6ZVW7 336 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 Q8N1Y9 231 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 EXOC3-AS1Q8N2X6 119 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 C15orf53Q8NAA6 179 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 SHANK2-AS3Q9BTD1 123 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 SPRY4Q9C004 299 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 RAXQ9Y2V3 346 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 KNTC1P50748 2209 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 ASXL3Q9C0F0 2248 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 IGHV5-10-1A0A0J9YXX1 117 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 H3BRN7 92 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 ZNF672Q499Z4 452 aaPredicted RBP6.01□□□□□ -1.45
CCR9-201ENST00000355983 CXorf67Q86X51 503 aaPredicted RBP6.01□□□□□ -1.45
CCR9-201ENST00000355983 TPPP3Q9BW30 176 aa6.01□□□□□ -1.45
CCR9-201ENST00000355983 LINC01548A6NM66 108 aa6□□□□□ -1.45
CCR9-201ENST00000355983 J3KT08 172 aa6□□□□□ -1.45
CCR9-201ENST00000355983 MRPS12O15235 138 aaKnown RBP6□□□□□ -1.45
CCR9-201ENST00000355983 TFF1P04155 84 aa6□□□□□ -1.45
CCR9-201ENST00000355983 WT1P19544 449 aaPredicted RBP6□□□□□ -1.45
CCR9-201ENST00000355983 SLC25A45Q8N413 288 aa6□□□□□ -1.45
CCR9-201ENST00000355983 C8orf31Q8N9H6 132 aa6□□□□□ -1.45
CCR9-201ENST00000355983 FAM57AQ8TBR7 257 aa6□□□□□ -1.45
CCR9-201ENST00000355983 BAALCQ8WXS3 180 aa6□□□□□ -1.45
CCR9-201ENST00000355983 PRR25Q96S07 402 aa6□□□□□ -1.45
CCR9-201ENST00000355983 PRO1854Q9UHT4 67 aa6□□□□□ -1.45
CCR9-201ENST00000355983 TRAV2A0A0B4J234 112 aa6□□□□□ -1.45
CCR9-201ENST00000355983 LGALS9O00182 355 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms