RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 CR1LQ2VPA4 569 aa10.79□□□□□ -0.68
TRIM4-203ENST00000355947 SAMD13Q5VXD3 122 aa10.79□□□□□ -0.68
TRIM4-203ENST00000355947 TM4SF5O14894 197 aa10.79□□□□□ -0.68
TRIM4-203ENST00000355947 HBDP02042 147 aa10.79□□□□□ -0.68
TRIM4-203ENST00000355947 FXYD2P54710 66 aa10.79□□□□□ -0.68
TRIM4-203ENST00000355947 HIF1ANQ9NWT6 349 aa10.79□□□□□ -0.68
TRIM4-203ENST00000355947 SOX21Q9Y651 276 aaPredicted RBP10.79□□□□□ -0.68
TRIM4-203ENST00000355947 SORL1Q92673 2214 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 CDX4O14627 284 aaPredicted RBP10.78□□□□□ -0.68
TRIM4-203ENST00000355947 SMIM13P0DJ93 91 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 MRPL51Q4U2R6 128 aaKnown RBP10.78□□□□□ -0.68
TRIM4-203ENST00000355947 FAM169BQ8N8A8 192 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 PRSS33Q8NF86 280 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 CTSZQ9UBR2 303 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 HAX1O00165 279 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 CRXO43186 299 aaPredicted RBP10.78□□□□□ -0.68
TRIM4-203ENST00000355947 MYCNOSP40205 109 aa10.78□□□□□ -0.68
TRIM4-203ENST00000355947 C17orf100A8MU93 164 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 K7EP34 96 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 SH2D1AO60880 128 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 IGLV2-23P01705 113 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 IGHG3P01860 377 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 ATP5IP56385 69 aaPredicted RBP10.77□□□□□ -0.68
TRIM4-203ENST00000355947 THAP8Q8NA92 274 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 TRGV9Q99603 122 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 KLF12Q9Y4X4 402 aa10.77□□□□□ -0.68
TRIM4-203ENST00000355947 SVEP1Q4LDE5 3571 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 CRIP1P50238 77 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 HSD52Q0P140 79 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 SH2D6Q7Z4S9 175 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 SIGLEC9Q9Y336 463 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 DOPEY2Q9Y3R5 2298 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 NDUFA3O95167 84 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 FSTL3O95633 263 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 RNF125Q96EQ8 232 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 ZNF492Q9P255 531 aa10.77□□□□□ -0.69
TRIM4-203ENST00000355947 IGKV2D-26A0A0A0MRZ7 120 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 ETDBQ3ZM63 59 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 MC5RP33032 325 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 ZC2HC1BQ5TFG8 222 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 IGKV3-7A0A075B6H7 116 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 TRAV26-2A0A0B4J265 109 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 FCN3O75636 299 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 ERCC8Q13216 396 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 ADAMTSL5Q6ZMM2 481 aa10.76□□□□□ -0.69
TRIM4-203ENST00000355947 ZNF785A8K8V0 405 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 H3BRM9 83 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 K7EM74 188 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 IGKV1-17P01599 117 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 IGHV1-8P0DP01 117 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 ADIPOQQ15848 244 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 FAM215AQ9Y5M1 114 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 TSSC4Q9Y5U2 329 aaPredicted RBP10.75□□□□□ -0.69
TRIM4-203ENST00000355947 RELNP78509 3460 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 TRBV19A0A075B6N1 114 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 NDUFS7O75251 213 aa10.75□□□□□ -0.69
TRIM4-203ENST00000355947 H3BMG7 143 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 IGLV2-11P01706 119 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 LGALS7P47929 136 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 CT83Q5H943 113 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 ARPC1AQ92747 370 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 IGLV3-9A0A075B6K5 115 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 LOXP28300 417 aaPredicted RBP10.74□□□□□ -0.69
TRIM4-203ENST00000355947 WFDC2Q14508 124 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 FAM104BQ5XKR9 115 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 HIST1H4GQ99525 98 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 VGLL1Q99990 258 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 GFRA4Q9GZZ7 299 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 A0A096LNJ9 63 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 TIMM23O14925 209 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 AZU1P20160 251 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 KLRD1Q13241 179 aa10.74□□□□□ -0.69
TRIM4-203ENST00000355947 COL25A1Q9BXS0 654 aaPredicted RBP10.74□□□□□ -0.69
TRIM4-203ENST00000355947 TRAV40A0A0B4J280 105 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 MAP1LC3AQ9H492 121 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 IGF2RP11717 2491 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 IGHV1-3A0A0C4DH29 117 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 EGR2P11161 476 aaPredicted RBP10.73□□□□□ -0.69
TRIM4-203ENST00000355947 RNF182Q8N6D2 247 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 NPFFR1Q9GZQ6 430 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 C16orf97H3BN30 126 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 TMEM158Q8WZ71 300 aa10.73□□□□□ -0.69
TRIM4-203ENST00000355947 ARL3P36405 182 aa10.72□□□□□ -0.69
TRIM4-203ENST00000355947 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
TRIM4-203ENST00000355947 AKAP13Q12802 2813 aa10.72□□□□□ -0.69
TRIM4-203ENST00000355947 G3V4G9 280 aa10.72□□□□□ -0.69
TRIM4-203ENST00000355947 FGF6P10767 208 aa10.72□□□□□ -0.69
TRIM4-203ENST00000355947 SIGLEC15Q6ZMC9 328 aa10.72□□□□□ -0.69
TRIM4-203ENST00000355947 NPIPB6E9PJ23 425 aa10.71□□□□□ -0.69
TRIM4-203ENST00000355947 EFNA4P52798 201 aa10.71□□□□□ -0.69
TRIM4-203ENST00000355947 LOC107984156A0A0G2JMH3 177 aa10.71□□□□□ -0.69
TRIM4-203ENST00000355947 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.71□□□□□ -0.69
TRIM4-203ENST00000355947 GATA4P43694 442 aa10.71□□□□□ -0.69
TRIM4-203ENST00000355947 ARL17AQ8IVW1 177 aa10.71□□□□□ -0.69
TRIM4-203ENST00000355947 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
TRIM4-203ENST00000355947 TMEM8BA6NDV4 472 aa10.71□□□□□ -0.7
TRIM4-203ENST00000355947 ZNF80P51504 273 aaPredicted RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms