RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 COL4A6Q14031 1691 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 SBF1O95248 1867 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 TNFRSF6BO95407 300 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 LMO1P25800 156 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 NDUFA4L2Q9NRX3 87 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 TMEM14BQ9NUH8 114 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 ANAPC10Q9UM13 185 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 TCTEX1D4Q5JR98 221 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 ZNF833PQ6ZTB9 187 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 J3QLI3 93 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 LOXP28300 417 aaPredicted RBP14.48□□□□□ -0.09
COL18A1-202ENST00000355480 TMEM75Q8N9X5 138 aa14.48□□□□□ -0.09
COL18A1-202ENST00000355480 ZNF625Q96I27 306 aaPredicted RBP14.47□□□□□ -0.09
COL18A1-202ENST00000355480 AZU1P20160 251 aa14.47□□□□□ -0.09
COL18A1-202ENST00000355480 C8orf49Q96NF6 230 aa14.47□□□□□ -0.09
COL18A1-202ENST00000355480 SYS1-DBNDD2H3BUS1 97 aa14.47□□□□□ -0.09
COL18A1-202ENST00000355480 C3orf79P0CE67 100 aa14.47□□□□□ -0.09
COL18A1-202ENST00000355480 TRBV25-1A0A075B6N4 114 aa14.47□□□□□ -0.09
COL18A1-202ENST00000355480 PFN1P07737 140 aaKnown RBP14.47□□□□□ -0.09
COL18A1-202ENST00000355480 GFRA4Q9GZZ7 299 aa14.47□□□□□ -0.09
COL18A1-202ENST00000355480 GAGE12BA1L429 117 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 GAGE7O76087 117 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 GAGE12FP0CL80 117 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 GAGE12GP0CL81 117 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 GAGE12IP0CL82 117 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 FHL1Q13642 323 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 PLA2G2CQ5R387 149 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 ANAPC13Q9BS18 74 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 C2orf82Q6UX34 121 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 MRPL27Q9P0M9 148 aaKnown RBP14.46□□□□□ -0.09
COL18A1-202ENST00000355480 APOC4P55056 127 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 PROK2Q9HC23 129 aa14.46□□□□□ -0.09
COL18A1-202ENST00000355480 A0A087X0K7 114 aa14.46□□□□□ -0.1
COL18A1-202ENST00000355480 E9PQ18 207 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 OVOL2Q9BRP0 275 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 USF3Q68DE3 2245 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 TMEM213A2RRL7 107 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 PAX9P55771 341 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 MCRIP2Q9BUT9 160 aaKnown RBP14.45□□□□□ -0.1
COL18A1-202ENST00000355480 ESDP10768 282 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 TRAV8-3A0A0A6YYJ7 113 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 C17orf58Q2M2W7 97 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 KIAA2026Q5HYC2 2103 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 TP53TG1Q9Y2A0 90 aa14.45□□□□□ -0.1
COL18A1-202ENST00000355480 C8orf86Q6ZUL3 223 aa14.44□□□□□ -0.1
COL18A1-202ENST00000355480 GPR179Q6PRD1 2367 aa14.44□□□□□ -0.1
COL18A1-202ENST00000355480 IGHV1OR15-1A0A075B7D0 117 aa14.44□□□□□ -0.1
COL18A1-202ENST00000355480 KLF12Q9Y4X4 402 aa14.44□□□□□ -0.1
COL18A1-202ENST00000355480 NDUFA4O00483 81 aa14.44□□□□□ -0.1
COL18A1-202ENST00000355480 TRAV12-2A0A075B6T6 113 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 ARFGEF3Q5TH69 2177 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 PKDREJQ9NTG1 2253 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 IGLV3-9A0A075B6K5 115 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 VWC2LB2RUY7 222 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 LYL1P12980 280 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 SIGMAR1Q99720 223 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 THSD7BQ9C0I4 1608 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 DOCK7Q96N67 2140 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 TRBV19A0A075B6N1 114 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 C1orf194Q5T5A4 169 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 ETV2O00321 342 aaPredicted RBP14.43□□□□□ -0.1
COL18A1-202ENST00000355480 WDR86Q86TI4 376 aa14.43□□□□□ -0.1
COL18A1-202ENST00000355480 REG4Q9BYZ8 158 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 TP53BP1Q12888 1972 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-202ENST00000355480 DNAJC30Q96LL9 226 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 ZNF48Q96MX3 618 aaPredicted RBP14.42□□□□□ -0.1
COL18A1-202ENST00000355480 PI4KAP42356 2102 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 GAGE2EQ4V326 116 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 TEX36Q5VZQ5 186 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 GAGE2DQ9UEU5 116 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 GBF1Q92538 1859 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 FANCMQ8IYD8 2048 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 I3L3M4 83 aa14.42□□□□□ -0.1
COL18A1-202ENST00000355480 ZNF503-AS2A6NEH8 195 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 CDKN1BP46527 198 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 PHF3Q92576 2039 aaKnown RBP14.41□□□□□ -0.1
COL18A1-202ENST00000355480 NCOR1P1Q9H4R4 102 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 ZNF492Q9P255 531 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 PMVKQ15126 192 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 DLX4Q92988 240 aaPredicted RBP14.41□□□□□ -0.1
COL18A1-202ENST00000355480 CGB3P0DN86 165 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 FAM215AQ9Y5M1 114 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 ZNRF2Q8NHG8 242 aa14.41□□□□□ -0.1
COL18A1-202ENST00000355480 CHAC1Q9BUX1 264 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 NBASA2RRP1 2371 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 PRSS46E5RG02 174 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 TPSG1Q9NRR2 321 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 ANK1P16157 1881 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 PFN2P35080 140 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 RPL32P62910 135 aaKnown RBP14.4□□□□□ -0.1
COL18A1-202ENST00000355480 NKAPP1Q8N9T2 125 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 DOCK10Q96BY6 2186 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 LINC00311Q8N616 119 aa14.4□□□□□ -0.1
COL18A1-202ENST00000355480 IGHV3-38A0A0C4DH36 116 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 MPV17L2Q567V2 206 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 GAGE6Q13070 117 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 OCIAD2Q56VL3 154 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 C2orf66Q6UXQ4 117 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 IGLV1-44P01699 117 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 GAGE2BQ13066 116 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms