RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 NFE4Q86UQ8 179 aa4.22□□□□□ -1.73
CD47-201ENST00000355354 MRPL41Q8IXM3 137 aaKnown RBP4.22□□□□□ -1.73
CD47-201ENST00000355354 TRAPPC1Q9Y5R8 145 aa4.22□□□□□ -1.73
CD47-201ENST00000355354 IGHV4-30-2A0A087WSY4 118 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 TRBV6-6A0A0A6YYG2 114 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 PGPA6NDG6 321 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 B4DEV8 164 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 PPP5D1E7EU14 171 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 ERVFC1-1P60608 527 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 CYCSP99999 105 aaKnown RBP4.21□□□□□ -1.73
CD47-201ENST00000355354 LINC00305Q7Z4B0 112 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 Q96MF0 132 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 SF3B5Q9BWJ5 86 aaKnown RBP4.21□□□□□ -1.73
CD47-201ENST00000355354 NAT8BQ9UHF3 227 aa4.21□□□□□ -1.73
CD47-201ENST00000355354 TIMM23O14925 209 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 C9orf139Q6ZV77 190 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 ZNF491Q8N8L2 437 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 C11orf44Q8N8P7 122 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 OR5AN1Q8NGI8 311 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 TPPP3Q9BW30 176 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 MOB1AQ9H8S9 216 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 BOKQ9UMX3 212 aaPredicted RBP4.21□□□□□ -1.74
CD47-201ENST00000355354 F11RQ9Y624 299 aaKnown RBP4.21□□□□□ -1.74
CD47-201ENST00000355354 CTXND1A0A1B0GTU2 59 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 TMEM127O75204 238 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 PPIAL4GP0DN37 164 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 TIGITQ495A1 244 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 TMEM41BQ5BJD5 291 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 Q6ZSN1 163 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 NAGKQ9UJ70 344 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 FAM90A5PA8MXJ8 464 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 FAM90A23PA8MXZ1 464 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 FAM90A15PP0C7V4 464 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 FAM90A13PP0C7W8 464 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 FAM90A24PP0C7X0 464 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 RPL39P62891 51 aaKnown RBP4.21□□□□□ -1.74
CD47-201ENST00000355354 PSG9Q00887 426 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 C1orf162Q8NEQ5 155 aaPredicted RBP4.21□□□□□ -1.74
CD47-201ENST00000355354 RNF185Q96GF1 192 aa4.21□□□□□ -1.74
CD47-201ENST00000355354 KBTBD11-OT1A0A1B0GTJ5 212 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 CD40P25942 277 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 PLGLB1Q02325 96 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 DEFB136Q30KP8 78 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 ACOT6Q3I5F7 207 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 SIGLEC15Q6ZMC9 328 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 CCDC71LQ8N9Z2 235 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 NUP37Q8NFH4 326 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 ESM1Q9NQ30 184 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 FOXA2Q9Y261 457 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 TIMM8AO60220 97 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 CRYGBP07316 175 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 CRYGDP07320 174 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 KRTAP10-3P60369 221 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 CD69Q07108 199 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 HARBI1Q96MB7 349 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 H7C1H1 209 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 CTSGP08311 255 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 CRISP2P16562 243 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 PHLDA1Q8WV24 401 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 NEIL1Q96FI4 390 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 TXNDC17Q9BRA2 123 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 TUBG2Q9NRH3 451 aa4.2□□□□□ -1.74
CD47-201ENST00000355354 AMMECR1Q9Y4X0 333 aaPredicted RBP4.2□□□□□ -1.74
CD47-201ENST00000355354 I3L2K1 104 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 DNPH1O43598 174 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 EIF5AP63241 154 aaKnown RBP4.19□□□□□ -1.74
CD47-201ENST00000355354 H2BFWTQ7Z2G1 175 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 PLEKHB2Q96CS7 222 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 RNF2Q99496 336 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 F2RL2O00254 374 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 IGHV3-11P01762 117 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 TCTEX1D1Q8N7M0 179 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 KIR2DL4Q99706 377 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 A0A1W2PRE2 83 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 FCGR2BP31994 310 aaPredicted RBP4.19□□□□□ -1.74
CD47-201ENST00000355354 CCDC140Q96MF4 163 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 C20orf78Q9BR46 151 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 LINC00470Q9BZP3 86 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.19□□□□□ -1.74
CD47-201ENST00000355354 TRAV8-2A0A0B4J237 113 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 HOXA3O43365 443 aaPredicted RBP4.19□□□□□ -1.74
CD47-201ENST00000355354 MT-CO2P00403 227 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 PLP2Q04941 152 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 C11orf52Q96A22 123 aa4.19□□□□□ -1.74
CD47-201ENST00000355354 TMEM250H0YL14 139 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 GNRH2O43555 120 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 IGKV3-20P01619 116 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 RAC2P15153 192 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 ETFRF1Q6IPR1 90 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 H1FXQ92522 213 aaKnown RBP4.18□□□□□ -1.74
CD47-201ENST00000355354 NPVFQ9HCQ7 196 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 CRYGCP07315 174 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 IGHV4-38-2P0DP08 117 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 IL17RELQ6ZVW7 336 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 Q8NDZ9 215 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 LSM10Q969L4 123 aaKnown RBP4.18□□□□□ -1.74
CD47-201ENST00000355354 TRAV12-2A0A075B6T6 113 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms