RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 HAX1O00165 279 aa12.96□□□□□ -0.33
PDAP1-201ENST00000350498 CEACAM3P40198 252 aa12.96□□□□□ -0.33
PDAP1-201ENST00000350498 ZNF738Q8NE65 137 aa12.96□□□□□ -0.33
PDAP1-201ENST00000350498 GFRA4Q9GZZ7 299 aa12.96□□□□□ -0.33
PDAP1-201ENST00000350498 IGHV3OR16-10A0A075B7F0 116 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 M0R1W7 72 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 HLA-DRB1P01911 266 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 HLA-DMBP28068 263 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 UCNP55089 124 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 ZNF414Q96IQ9 312 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 PSG8Q9UQ74 426 aa12.96□□□□□ -0.34
PDAP1-201ENST00000350498 A0A1B0GUT8 65 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 TMEM213A2RRL7 107 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 UBE2V1Q13404 147 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 BPIFA4PQ86YQ2 179 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 TMEM14CQ9P0S9 112 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 SELENOKQ9Y6D0 94 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 ZNF562Q6V9R5 426 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 AJUBAQ96IF1 538 aa12.95□□□□□ -0.34
PDAP1-201ENST00000350498 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 SERTM2A0A1B0GWG4 89 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 WI2-2373I1.2A0A1W2PRP0 233 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 TMEM11P17152 192 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 MAP1LC3CQ9BXW4 147 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 CBY3A6NI87 242 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 IFI27P40305 119 aaPredicted RBP12.94□□□□□ -0.34
PDAP1-201ENST00000350498 C16orf54Q6UWD8 224 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 DTX2Q86UW9 622 aa12.94□□□□□ -0.34
PDAP1-201ENST00000350498 SOX21Q9Y651 276 aaPredicted RBP12.94□□□□□ -0.34
PDAP1-201ENST00000350498 Q8N6K4 173 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 SIRPDQ9H106 197 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 IGHV3OR16-13A0A075B7E8 117 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 IGKV2-40A0A087WW87 121 aaPredicted RBP12.93□□□□□ -0.34
PDAP1-201ENST00000350498 IGHV3-74A0A0B4J1X5 117 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 IGKV2D-40P01614 121 aaPredicted RBP12.93□□□□□ -0.34
PDAP1-201ENST00000350498 VAMP3Q15836 100 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 BVES-AS1Q5T3Y7 98 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 ST20Q9HBF5 79 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 SCRT2Q9NQ03 307 aa12.93□□□□□ -0.34
PDAP1-201ENST00000350498 IGHV3-66A0A0C4DH42 116 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 PSG3Q16557 428 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 ECSCRQ19T08 205 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 SLC25A34Q6PIV7 304 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 Q8N9W7 124 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 TMEM191AQ9H0A3 160 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 C21orf62Q9NYP8 219 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 G3V318 75 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 SMKR1H3BMG3 65 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 TAX1BP3O14907 124 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 CTSGP08311 255 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 OR5AL1P0C617 328 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 GNLYP22749 145 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 RELQ04864 619 aaPredicted RBP12.92□□□□□ -0.34
PDAP1-201ENST00000350498 AMN1Q8IY45 258 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 Q8TAT8 98 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 AP5S1Q9NUS5 200 aa12.92□□□□□ -0.34
PDAP1-201ENST00000350498 A0A096LNJ9 63 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 D6R8Y8 96 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 MFAP4P55083 255 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 PRSS3P2Q8NHM4 247 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 RNF24Q9Y225 148 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 FAM231BA6NCW3 169 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 PCP4P48539 62 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 TTC9CQ8N5M4 171 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 OR8A1Q8NGG7 326 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 LINC00527Q9UJ94 153 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
PDAP1-201ENST00000350498 NPIPB5A8MRT5 1133 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 SAA4P35542 130 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 WFDC3Q8IUB2 231 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 TMEM75Q8N9X5 138 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 SRSF8Q9BRL6 282 aaKnown RBP12.9□□□□□ -0.34
PDAP1-201ENST00000350498 ZNF747Q9BV97 191 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 CENPEQ02224 2701 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 IGHV3-49A0A0A0MS15 119 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 HSBP1L1C9JCN9 74 aa12.9□□□□□ -0.34
PDAP1-201ENST00000350498 USP9XQ93008 2570 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-201ENST00000350498 IGSF10Q6WRI0 2623 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 GPR183P32249 361 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 RBX1P62877 108 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 FAM162BQ5T6X4 162 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 TMEM219Q86XT9 240 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 PPP1R14DQ9NXH3 145 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 ATP6V0E1O15342 81 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 LMO4P61968 165 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 RIGQ13278 110 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
PDAP1-201ENST00000350498 ITLN2Q8WWU7 325 aaPredicted RBP12.89□□□□□ -0.35
PDAP1-201ENST00000350498 LINC01545Q5VT33 79 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 PET117Q6UWS5 81 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 FA2HQ7L5A8 372 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 CBY1Q9Y3M2 126 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 GAS8-AS1O95177 125 aa12.88□□□□□ -0.35
PDAP1-201ENST00000350498 ZNF80P51504 273 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms