RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 CAMPP49913 170 aa15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 C1orf194Q5T5A4 169 aa15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 PGLYRP4Q96LB8 373 aa15.73■□□□□ 0.11
CHRNA3-202ENST00000348639 USP9YO00507 2555 aaPredicted RBP15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 TGFAP01135 160 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 IGHG4P01861 327 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 FOXA3P55318 350 aaPredicted RBP15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 ASCL2Q99929 193 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 H3BUA1 57 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 CHEK1O14757 476 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 PPIFP30405 207 aaKnown RBP15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 CRIP1P50238 77 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 METTL26Q96S19 204 aa15.72■□□□□ 0.11
CHRNA3-202ENST00000348639 PTPN13Q12923 2485 aa15.71■□□□□ 0.11
CHRNA3-202ENST00000348639 RNF223E7ERA6 249 aa15.71■□□□□ 0.11
CHRNA3-202ENST00000348639 COX8CQ7Z4L0 72 aa15.71■□□□□ 0.11
CHRNA3-202ENST00000348639 C8orf49Q96NF6 230 aa15.71■□□□□ 0.11
CHRNA3-202ENST00000348639 IGKV2-40A0A087WW87 121 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 A8MWP6 167 aa15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 IGKV2D-40P01614 121 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 CT45A10P0DMU9 189 aa15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 BLCAPP62952 87 aa15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 SAPCD1Q5SSQ6 148 aa15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 SSBP4Q9BWG4 385 aaPredicted RBP15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 U3KQE9 123 aa15.7■□□□□ 0.1
CHRNA3-202ENST00000348639 CSPG4Q6UVK1 2322 aa15.69■□□□□ 0.1
CHRNA3-202ENST00000348639 IQCJQ1A5X6 159 aa15.69■□□□□ 0.1
CHRNA3-202ENST00000348639 IGFL4Q6B9Z1 124 aa15.69■□□□□ 0.1
CHRNA3-202ENST00000348639 ABCA12Q86UK0 2595 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 J3QLI3 93 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 HLA-DMBP28068 263 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 LCN12Q6JVE5 192 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 C18orf32Q8TCD1 76 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 USMG5Q96IX5 58 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 RCHY1Q96PM5 261 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 SAMD10Q9BYL1 202 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 APOHP02749 345 aaPredicted RBP15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 KCNS1Q96KK3 526 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 PRR25Q96S07 402 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 SLC50A1Q9BRV3 221 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 ZANQ9Y493 2812 aa15.68■□□□□ 0.1
CHRNA3-202ENST00000348639 IGHV3-66A0A0C4DH42 116 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 HAX1O00165 279 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 ARL3P36405 182 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 PKIAP61925 76 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 KLF5Q13887 457 aaPredicted RBP15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 DEFB113Q30KQ7 82 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 Q6ZS46 218 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 ALKBH7Q9BT30 221 aaPredicted RBP15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 ZNF705FA8MVS1 300 aaPredicted RBP15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 GPX1P07203 203 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 Q6ZWC4 215 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 VGLL1Q99990 258 aa15.67■□□□□ 0.1
CHRNA3-202ENST00000348639 A0A1W2PS18 150 aa15.66■□□□□ 0.1
CHRNA3-202ENST00000348639 ZNF207O43670 478 aaKnown RBP15.66■□□□□ 0.1
CHRNA3-202ENST00000348639 DEFB112Q30KQ8 113 aa15.66■□□□□ 0.1
CHRNA3-202ENST00000348639 SIGLECL1Q8N7X8 197 aa15.66■□□□□ 0.1
CHRNA3-202ENST00000348639 IGHV3OR16-13A0A075B7E8 117 aa15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 IGHV3-74A0A0B4J1X5 117 aa15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 LOXL1Q08397 574 aaPredicted RBP15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 Q5PR19 223 aa15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 FAM162BQ5T6X4 162 aa15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 Q6AWC8 147 aa15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 SCGB1D1O95968 90 aa15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 BEX4Q9NWD9 120 aaPredicted RBP15.65■□□□□ 0.1
CHRNA3-202ENST00000348639 NAV2Q8IVL1 2488 aa15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 A0A1B0GUT8 65 aa15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 TSTD3H0UI37 97 aa15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 SH2D1AO60880 128 aa15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 IGHV4-59P01825 116 aa15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 NAGKQ9UJ70 344 aa15.64■□□□□ 0.09
CHRNA3-202ENST00000348639 IGHV3-49A0A0A0MS15 119 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 RBAKDNA6NC62 111 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 NDUFA4O00483 81 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 IGLV1-40P01703 118 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 PLA2G2AP14555 144 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 Q8TAT8 98 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 KLK15Q9H2R5 256 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 ZNF580Q9UK33 172 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 ZNF324O75467 553 aaPredicted RBP15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 TRBV12-3P01733 135 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 PF4V1P10720 104 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 RNF182Q8N6D2 247 aa15.63■□□□□ 0.09
CHRNA3-202ENST00000348639 TMEM189A5PLL7 270 aa15.62■□□□□ 0.09
CHRNA3-202ENST00000348639 IGHV4-31P0DP07 118 aa15.62■□□□□ 0.09
CHRNA3-202ENST00000348639 AMTP48728 403 aa15.62■□□□□ 0.09
CHRNA3-202ENST00000348639 CFHR3Q02985 330 aa15.62■□□□□ 0.09
CHRNA3-202ENST00000348639 RIGQ13278 110 aa15.62■□□□□ 0.09
CHRNA3-202ENST00000348639 A0A1B0GW15 77 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 PRAC2D3DTV9 90 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 ARMS2P0C7Q2 107 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 C8orf86Q6ZUL3 223 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 ZNF664Q8N3J9 261 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 MRPL53Q96EL3 112 aaKnown RBP15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 NDFIP1Q9BT67 221 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 PRO1933Q9H354 126 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 TRAV8-2A0A0B4J237 113 aa15.61■□□□□ 0.09
CHRNA3-202ENST00000348639 A0A0G2JLM5 398 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms