RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 ZNF253O75346 499 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 ZNF705DP0CH99 300 aaPredicted RBP15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 ZNF705BP0CI00 300 aaPredicted RBP15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 FXYD5Q96DB9 178 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 AAMDCQ9H7C9 122 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 ZNF705FA8MVS1 300 aaPredicted RBP15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 C4BPBP20851 252 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 AKR1C8PQ5T2L2 129 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 TEX261Q6UWH6 196 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 OVOL2Q9BRP0 275 aa15.26■□□□□ 0.03
SMARCB1-202ENST00000344921 DUSP14O95147 198 aaKnown RBP15.25■□□□□ 0.03
SMARCB1-202ENST00000344921 HIST1H1AQ02539 215 aaPredicted RBP15.25■□□□□ 0.03
SMARCB1-202ENST00000344921 PQLC2Q6ZP29 291 aa15.25■□□□□ 0.03
SMARCB1-202ENST00000344921 RAB24Q969Q5 203 aa15.25■□□□□ 0.03
SMARCB1-202ENST00000344921 ZNF503Q96F45 646 aa15.25■□□□□ 0.03
SMARCB1-202ENST00000344921 ACTR3CQ9C0K3 210 aaPredicted RBP15.25■□□□□ 0.03
SMARCB1-202ENST00000344921 NDUFB4O95168 129 aa15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 IFNA7P01567 189 aa15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 CNN1P51911 297 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 FXYD7P58549 80 aa15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 EIF5AP63241 154 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 LGALSLQ3ZCW2 172 aaPredicted RBP15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 OR8A1Q8NGG7 326 aa15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 RNF183Q96D59 192 aa15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 TP53TG1Q9Y2A0 90 aa15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 HUWE1Q7Z6Z7 4374 aaKnown RBP15.24■□□□□ 0.03
SMARCB1-202ENST00000344921 EXOC3-AS1Q8N2X6 119 aa15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 ZNF680Q8NEM1 530 aa15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 C1QTNF4Q9BXJ3 329 aa15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 RANP62826 216 aaKnown RBP15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 ICAM4Q14773 271 aa15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 PPP1R14DQ9NXH3 145 aa15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 XCL2Q9UBD3 114 aa15.23■□□□□ 0.03
SMARCB1-202ENST00000344921 CLLU1Q5K131 121 aa15.22■□□□□ 0.03
SMARCB1-202ENST00000344921 OR10J6PQ8NGY7 276 aa15.22■□□□□ 0.03
SMARCB1-202ENST00000344921 PHYHIPLQ96FC7 376 aa15.22■□□□□ 0.03
SMARCB1-202ENST00000344921 CLUHP3Q96NS8 147 aa15.22■□□□□ 0.03
SMARCB1-202ENST00000344921 SLC35B3Q9H1N7 401 aa15.22■□□□□ 0.03
SMARCB1-202ENST00000344921 PRELID1Q9Y255 219 aa15.22■□□□□ 0.03
SMARCB1-202ENST00000344921 M0R3E3 92 aa15.21■□□□□ 0.03
SMARCB1-202ENST00000344921 GIG44P09565 113 aaPredicted RBP15.21■□□□□ 0.03
SMARCB1-202ENST00000344921 STAG3L2P0CL84 134 aa15.21■□□□□ 0.03
SMARCB1-202ENST00000344921 STAG3L3P0CL85 134 aa15.21■□□□□ 0.03
SMARCB1-202ENST00000344921 ARL14EPLP0DKL9 152 aa15.21■□□□□ 0.03
SMARCB1-202ENST00000344921 TPT1P13693 172 aaKnown RBP15.2■□□□□ 0.02
SMARCB1-202ENST00000344921 BAP18Q8IXM2 172 aa15.2■□□□□ 0.02
SMARCB1-202ENST00000344921 RARRES2Q99969 163 aa15.2■□□□□ 0.02
SMARCB1-202ENST00000344921 PRAC2D3DTV9 90 aa15.2■□□□□ 0.02
SMARCB1-202ENST00000344921 SEC11BP0C7V7 166 aa15.2■□□□□ 0.02
SMARCB1-202ENST00000344921 IQCF2Q8IXL9 164 aa15.2■□□□□ 0.02
SMARCB1-202ENST00000344921 TENM3Q9P273 2699 aa15.19■□□□□ 0.02
SMARCB1-202ENST00000344921 CXorf1O96002 111 aa15.19■□□□□ 0.02
SMARCB1-202ENST00000344921 LYPD1Q8N2G4 141 aa15.19■□□□□ 0.02
SMARCB1-202ENST00000344921 OR11H2Q8NH07 326 aa15.19■□□□□ 0.02
SMARCB1-202ENST00000344921 MRPL53Q96EL3 112 aaKnown RBP15.19■□□□□ 0.02
SMARCB1-202ENST00000344921 Q9H3A6 140 aa15.19■□□□□ 0.02
SMARCB1-202ENST00000344921 CTXND1A0A1B0GTU2 59 aa15.18■□□□□ 0.02
SMARCB1-202ENST00000344921 SSX7Q7RTT5 188 aa15.18■□□□□ 0.02
SMARCB1-202ENST00000344921 CSN1S1P47710 185 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 SPINK13Q1W4C9 94 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 TOR2AQ5JU69 321 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 WWC2-AS2Q96NR7 200 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 M0R2Z0 102 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 GCHFRP30047 84 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 RAB14P61106 215 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 ZNF726P1Q15940 193 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 FAM74A1Q5RGS3 127 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 AMTNQ6UX39 209 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 TMED6Q8WW62 240 aa15.17■□□□□ 0.02
SMARCB1-202ENST00000344921 A8MTW9 85 aa15.16■□□□□ 0.02
SMARCB1-202ENST00000344921 CSNK1G2-AS1Q8NCQ2 148 aa15.16■□□□□ 0.02
SMARCB1-202ENST00000344921 STOML3Q8TAV4 291 aa15.16■□□□□ 0.02
SMARCB1-202ENST00000344921 TMEM167BQ9NRX6 74 aa15.16■□□□□ 0.02
SMARCB1-202ENST00000344921 IGHV3OR16-12A0A075B7B8 117 aa15.15■□□□□ 0.02
SMARCB1-202ENST00000344921 UMAD1C9J7I0 102 aa15.15■□□□□ 0.02
SMARCB1-202ENST00000344921 TMA7Q9Y2S6 64 aaKnown RBP15.15■□□□□ 0.02
SMARCB1-202ENST00000344921 PGPA6NDG6 321 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 EIF5AL1Q6IS14 154 aaKnown RBP15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 CMTM2Q8TAZ6 248 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 OTORQ9NRC9 128 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 MED9Q9NWA0 146 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 AMBPP02760 352 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 FHITP49789 147 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 FGF8P55075 233 aaPredicted RBP15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 SLC51BQ86UW2 128 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 FAM213BQ8TBF2 198 aa15.14■□□□□ 0.01
SMARCB1-202ENST00000344921 IGKV2-40A0A087WW87 121 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 MAP1LC3B2A6NCE7 125 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 IGKV2D-40P01614 121 aaPredicted RBP15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 ERCC8Q13216 396 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 RXFP4Q8TDU9 374 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 MAP1LC3BQ9GZQ8 125 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 EDA2RQ9HAV5 297 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 PLA2G2EQ9NZK7 142 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 RPH3ALQ9UNE2 315 aa15.13■□□□□ 0.01
SMARCB1-202ENST00000344921 TRAV12-2A0A075B6T6 113 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 A0A0J9YWU9 116 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 NPIPB6E9PJ23 425 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 IGF2BP2-AS1Q96M15 143 aa15.12■□□□□ 0.01
SMARCB1-202ENST00000344921 TMEM208Q9BTX3 173 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms