RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 NHLH2Q02577 135 aa14.26□□□□□ -0.13
CEACAM3-201ENST00000344550 BAP18Q8IXM2 172 aa14.26□□□□□ -0.13
CEACAM3-201ENST00000344550 H7BYZ3 331 aa14.25□□□□□ -0.13
CEACAM3-201ENST00000344550 SIX6O95475 246 aa14.25□□□□□ -0.13
CEACAM3-201ENST00000344550 DAD1P61803 113 aa14.25□□□□□ -0.13
CEACAM3-201ENST00000344550 LINC01587Q99440 93 aa14.25□□□□□ -0.13
CEACAM3-201ENST00000344550 EPPK1P58107 5090 aaKnown RBP14.25□□□□□ -0.13
CEACAM3-201ENST00000344550 TRBV19A0A075B6N1 114 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 SLC17A3O00476 420 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 H2BFSP57053 126 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 PPP1R1CQ8WVI7 109 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 C16orf74Q96GX8 76 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 ZNF586Q9NXT0 402 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 OR5AC2Q9NZP5 309 aa14.24□□□□□ -0.13
CEACAM3-201ENST00000344550 TRAV12-2A0A075B6T6 113 aa14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 TRAV5A0A0B4J249 113 aa14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 ZNF705GA8MUZ8 300 aaPredicted RBP14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 H0YIZ8 118 aa14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 SSNA1O43805 119 aa14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 LRRC37A5PQ49AS3 106 aa14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 POM121L12Q8N7R1 296 aa14.23□□□□□ -0.13
CEACAM3-201ENST00000344550 NPIPB6E9PJ23 425 aa14.22□□□□□ -0.13
CEACAM3-201ENST00000344550 C17orf112F2Z3M2 114 aa14.22□□□□□ -0.13
CEACAM3-201ENST00000344550 MRPL32Q9BYC8 188 aaKnown RBP14.22□□□□□ -0.13
CEACAM3-201ENST00000344550 WDR61Q9GZS3 305 aaKnown RBP14.22□□□□□ -0.13
CEACAM3-201ENST00000344550 VPS13DQ5THJ4 4388 aa14.21□□□□□ -0.13
CEACAM3-201ENST00000344550 MPC2O95563 127 aa14.21□□□□□ -0.13
CEACAM3-201ENST00000344550 LEPP41159 167 aa14.21□□□□□ -0.13
CEACAM3-201ENST00000344550 TMEM263Q8WUH6 116 aaKnown RBP14.21□□□□□ -0.13
CEACAM3-201ENST00000344550 TIMM9Q9Y5J7 89 aa14.21□□□□□ -0.13
CEACAM3-201ENST00000344550 TIMM8BQ9Y5J9 83 aaPredicted RBP14.21□□□□□ -0.13
CEACAM3-201ENST00000344550 PLAC8L1A1L4L8 177 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 PRAC2D3DTV9 90 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 SNRPCP09234 159 aaKnown RBP14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 RNF212Q495C1 297 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 C15orf53Q8NAA6 179 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 THAP6Q8TBB0 222 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 LINC00477Q96M19 166 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 ATP5SQ99766 215 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 AAMDCQ9H7C9 122 aa14.2□□□□□ -0.14
CEACAM3-201ENST00000344550 CBY3A6NI87 242 aa14.19□□□□□ -0.14
CEACAM3-201ENST00000344550 H3BTX0 84 aa14.19□□□□□ -0.14
CEACAM3-201ENST00000344550 CLINT1Q14677 625 aa14.19□□□□□ -0.14
CEACAM3-201ENST00000344550 CCDC28AQ8IWP9 274 aa14.19□□□□□ -0.14
CEACAM3-201ENST00000344550 RNASE8Q8TDE3 154 aaKnown RBP14.19□□□□□ -0.14
CEACAM3-201ENST00000344550 BIRC6Q9NR09 4857 aa14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 NDUFB4O95168 129 aa14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 NMBP08949 121 aa14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 AZU1P20160 251 aa14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 FAM3BP58499 235 aaPredicted RBP14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 FAM167A-AS1Q96KT0 104 aa14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 PARD6GQ9BYG4 376 aaPredicted RBP14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 HSPB11Q9Y547 144 aa14.18□□□□□ -0.14
CEACAM3-201ENST00000344550 SLC25A5P05141 298 aaKnown RBP14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 NBEAP1P0C6P0 100 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 CT45A10P0DMU9 189 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 GFI1BQ5VTD9 330 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 PYGO2Q9BRQ0 406 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 SLC25A2Q9BXI2 301 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 OR51M1Q9H341 326 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 PLA2G2EQ9NZK7 142 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 FUT9Q9Y231 359 aa14.17□□□□□ -0.14
CEACAM3-201ENST00000344550 IFNA5P01569 189 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 ATP5G1P05496 136 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 RPL12P30050 165 aaKnown RBP14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 ATP5G3P48201 142 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 GCSAMLQ5JQS6 135 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 C9orf47Q6ZRZ4 202 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 LYPD1Q8N2G4 141 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 SCGB1C1Q8TD33 95 aa14.16□□□□□ -0.14
CEACAM3-201ENST00000344550 TRBV7-9A0A0J9YWB2 115 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 PTTG1O95997 202 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 PRM2P04554 102 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 DEFB130BP0DP73 79 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 DEFB130AP0DP74 79 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 PYYP10082 97 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 HTN3P15516 51 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 TMEM88Q6PEY1 159 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 LINC00336Q6ZUF6 198 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 LINC00467Q9BRT7 94 aa14.15□□□□□ -0.14
CEACAM3-201ENST00000344550 M0R3E3 92 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 HTN1P15515 57 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 CRISP2P16562 243 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 LGALS9BQ3B8N2 356 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 MIR17HGQ75NE6 70 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 RNF141Q8WVD5 230 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 FAM19A4Q96LR4 140 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 PAXXQ9BUH6 204 aa14.14□□□□□ -0.15
CEACAM3-201ENST00000344550 KLLNB2CW77 178 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 TAS2R45P59539 299 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 LINC00612Q8N6U2 182 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 BLNKQ8WV28 456 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 ASB13Q8WXK3 278 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 MBD2Q9UBB5 411 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 DNAH6Q9C0G6 4158 aa14.13□□□□□ -0.15
CEACAM3-201ENST00000344550 DAZ2Q13117 558 aaKnown RBP14.12□□□□□ -0.15
CEACAM3-201ENST00000344550 ICAM4Q14773 271 aa14.12□□□□□ -0.15
CEACAM3-201ENST00000344550 KIR3DS1Q14943 382 aa14.12□□□□□ -0.15
CEACAM3-201ENST00000344550 UBE2DNLQ8IWF7 75 aa14.12□□□□□ -0.15
CEACAM3-201ENST00000344550 FXYD5Q96DB9 178 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms