RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 LINC01549A6NIU2 74 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 IGHV4-38-2P0DP08 117 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 NUP35Q8NFH5 326 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 SLC25A2Q9BXI2 301 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 IGHV3-73A0A0B4J1V6 119 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 GUSBP1Q15486 140 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 MRPS16Q9Y3D3 137 aaKnown RBP15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BKO60814 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BJP06899 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BOP23527 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BBP33778 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BDP58876 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BCP62807 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST2H2BEQ16778 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 NIT1Q86X76 327 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 TMEM75Q8N9X5 138 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BHQ93079 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BNQ99877 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 HIST1H2BMQ99879 126 aa15.56■□□□□ 0.08
SEMA6C-201ENST00000341697 FREM1Q5H8C1 2179 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 H3BRN7 92 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 AMBPP02760 352 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 THAP8Q8NA92 274 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 OR9G4Q8NGQ1 327 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 MRPL27Q9P0M9 148 aaKnown RBP15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 CXCL1P09341 107 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 CD28P10747 220 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 FABP2P12104 132 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 FAM90A2PQ658T7 463 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 IGLC7A0M8Q6 106 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 D6R8Y8 96 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 C8orf86Q6ZUL3 223 aa15.55■□□□□ 0.08
SEMA6C-201ENST00000341697 NCR2O95944 276 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 GFI1BQ5VTD9 330 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 CIDEAO60543 219 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 MALP21145 153 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 MSMPQ1L6U9 139 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 HAPLN4Q86UW8 402 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 OR13C6PQ8NH95 151 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 TMEM14CQ9P0S9 112 aa15.54■□□□□ 0.08
SEMA6C-201ENST00000341697 CRPP02741 224 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 ZNF876PQ49A33 203 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 IGHV3-53P01767 116 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 PLCE1Q9P212 2302 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 MCRIP2Q9BUT9 160 aaKnown RBP15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 LINC00518Q8N0U6 118 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 DMRT1Q9Y5R6 373 aa15.53■□□□□ 0.08
SEMA6C-201ENST00000341697 ADARB2-AS1A8MUL3 147 aa15.52■□□□□ 0.08
SEMA6C-201ENST00000341697 C14orf178Q8N769 122 aaPredicted RBP15.52■□□□□ 0.08
SEMA6C-201ENST00000341697 LAGE3Q14657 143 aa15.52■□□□□ 0.08
SEMA6C-201ENST00000341697 MST1LQ2TV78 715 aa15.52■□□□□ 0.08
SEMA6C-201ENST00000341697 XCL2Q9UBD3 114 aa15.52■□□□□ 0.08
SEMA6C-201ENST00000341697 COLCA2A8K830 154 aa15.52■□□□□ 0.07
SEMA6C-201ENST00000341697 NPBQ8NG41 125 aa15.52■□□□□ 0.07
SEMA6C-201ENST00000341697 A0A087WX48 190 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 ARL6IP6Q8N6S5 226 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 C14orf144Q96I85 54 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 IGHV7-4-1A0A0J9YVY3 117 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 DOCK11Q5JSL3 2073 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 RIPPLY3P57055 190 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 SPINK13Q1W4C9 94 aa15.51■□□□□ 0.07
SEMA6C-201ENST00000341697 ARMS2P0C7Q2 107 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 CEP192Q8TEP8 1941 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 IFI27L1Q96BM0 104 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 IGKV3D-20A0A0C4DH25 116 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 DPM2O94777 84 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 IL15RAQ13261 267 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 GFRA4Q9GZZ7 299 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 NCOR2Q9Y618 2525 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 GAGE10A6NGK3 116 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 PFN1P07737 140 aaKnown RBP15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 ZNF492Q9P255 531 aa15.5■□□□□ 0.07
SEMA6C-201ENST00000341697 FNDC4Q9H6D8 234 aaPredicted RBP15.49■□□□□ 0.07
SEMA6C-201ENST00000341697 VCYO14598 125 aa15.49■□□□□ 0.07
SEMA6C-201ENST00000341697 TSSC4Q9Y5U2 329 aaPredicted RBP15.49■□□□□ 0.07
SEMA6C-201ENST00000341697 ZNF491Q8N8L2 437 aa15.49■□□□□ 0.07
SEMA6C-201ENST00000341697 IGFBPL1Q8WX77 278 aa15.49■□□□□ 0.07
SEMA6C-201ENST00000341697 ZNF726P1Q15940 193 aa15.49■□□□□ 0.07
SEMA6C-201ENST00000341697 SNAI2O43623 268 aa15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 ZFP36P26651 326 aaKnown RBP15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 CHTOPQ9Y3Y2 248 aaKnown RBP15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 DEFB130BP0DP73 79 aa15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 DEFB130AP0DP74 79 aa15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 SRCAPQ6ZRS2 3230 aa15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 IGHV7-81A0A0B4J1V7 117 aa15.48■□□□□ 0.07
SEMA6C-201ENST00000341697 LINC01559Q495D7 138 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 PRR31Q5SQ13 230 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 ST6GALNAC6Q969X2 333 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 GGTLC3B5MD39 225 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 UBE2DNLQ8IWF7 75 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 PRR20EP86478 221 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 PRR20CP86479 221 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 PRR20DP86480 221 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 PRR20BP86481 221 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 PRR20AP86496 221 aa15.47■□□□□ 0.07
SEMA6C-201ENST00000341697 A0A087WWL8 130 aa15.46■□□□□ 0.07
SEMA6C-201ENST00000341697 C8orf49Q96NF6 230 aa15.46■□□□□ 0.07
SEMA6C-201ENST00000341697 VGLL1Q99990 258 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms