RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MIXL1Q9H2W2 232 aa10.9□□□□□ -0.66
NECTIN1-202ENST00000340882 Q9H521 79 aa10.9□□□□□ -0.66
NECTIN1-202ENST00000340882 TP53TG3Q9ULZ0 132 aa10.9□□□□□ -0.66
NECTIN1-202ENST00000340882 SMCO3A2RU48 225 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 E5RGE8 158 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 K7EP13 123 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 K7EQD1 137 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 AKAIN1P0CW23 69 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 CXCL2P19875 107 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 LEPP41159 167 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 TCL1AP56279 114 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 CD300CQ08708 224 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 WFDC2Q14508 124 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 MORN5Q5VZ52 161 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 MZT2AQ6P582 158 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 ZNF680Q8NEM1 530 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 SLC50A1Q9BRV3 221 aa10.89□□□□□ -0.67
NECTIN1-202ENST00000340882 SYNGR2O43760 224 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 CCNKO75909 580 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 SSBP1Q04837 148 aaKnown RBP10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 BTN1A1Q13410 526 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 Q6ZQT7 251 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 CLVS1Q8IUQ0 354 aaPredicted RBP10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 ODF3Q96PU9 254 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 PRRT1Q99946 306 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 ARV1Q9H2C2 271 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 LRP2P98164 4655 aa10.88□□□□□ -0.67
NECTIN1-202ENST00000340882 C7orf71A4D174 169 aa10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 H3BQ15 152 aa10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 ERCC8Q13216 396 aa10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 ANXA2RQ3ZCQ2 193 aa10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 EIF4E3Q8N5X7 224 aaKnown RBP10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 CIB3Q96Q77 187 aaPredicted RBP10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 VGLL1Q99990 258 aa10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 MRPL32Q9BYC8 188 aaKnown RBP10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 RCL1Q9Y2P8 373 aaKnown RBP10.87□□□□□ -0.67
NECTIN1-202ENST00000340882 MED6O75586 246 aa10.86□□□□□ -0.67
NECTIN1-202ENST00000340882 SRIP30626 198 aa10.86□□□□□ -0.67
NECTIN1-202ENST00000340882 RPP30P78346 268 aaKnown RBP10.86□□□□□ -0.67
NECTIN1-202ENST00000340882 SCXQ7RTU7 201 aa10.86□□□□□ -0.67
NECTIN1-202ENST00000340882 SMIM4Q8WVI0 70 aa10.86□□□□□ -0.67
NECTIN1-202ENST00000340882 KLLNB2CW77 178 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 SLC25A5P05141 298 aaKnown RBP10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 SFTA3P0C7M3 94 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 IGLC2P0DOY2 106 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 RRAS2P62070 204 aaPredicted RBP10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 SRPXP78539 464 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 SLC38A11Q08AI6 406 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 SLAQ13239 276 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 LINC01620Q4KN68 170 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 LINC00305Q7Z4B0 112 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 C10orf126Q8N4M7 172 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 NAA50Q9GZZ1 169 aaKnown RBP10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 Q9HAA7 133 aa10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 STRAPQ9Y3F4 350 aaKnown RBP10.85□□□□□ -0.67
NECTIN1-202ENST00000340882 SLC25A6P12236 298 aa10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 ANXA3P12429 323 aa10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 GYPEP15421 78 aa10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 RNASE4P34096 147 aaKnown RBP10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 SELENOTP62341 195 aa10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 ZNF479Q96JC4 524 aa10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
NECTIN1-202ENST00000340882 DUXBA0A1W2PPF3 345 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 IBA57-AS1B1ANH7 110 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 OPCMLQ14982 345 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 PRR9Q5T870 116 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 BPIFA4PQ86YQ2 179 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 TMEM37Q8WXS4 190 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 PXMP4Q9Y6I8 212 aa10.83□□□□□ -0.68
NECTIN1-202ENST00000340882 TRGV4A0A0C4DH28 118 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 LOC100131303A0A0U1RQF7 123 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 M0R3E3 92 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 CTDSP2O14595 271 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 ATP6V1G2O95670 118 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 MRPS10P82664 201 aaKnown RBP10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 IBA57Q5T440 356 aaKnown RBP10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 LRTM2Q8N967 370 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 AP3S1Q92572 193 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 SCP2D1Q9UJQ7 156 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 RABL2BQ9UNT1 228 aa10.82□□□□□ -0.68
NECTIN1-202ENST00000340882 TRAV5A0A0B4J249 113 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 K7EPK0 472 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 MPDU1O75352 247 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 POLR2GP62487 172 aaKnown RBP eCLIP10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 SCGB3A2Q96PL1 93 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 AGPAT4-IT1Q9H0P7 198 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 MCUBQ9NWR8 336 aa10.81□□□□□ -0.68
NECTIN1-202ENST00000340882 A0A087WXM4 84 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 LECT2O14960 151 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 HOXB5P09067 269 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 OR4E1P0C645 316 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 CTF1Q16619 201 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 C4orf46Q504U0 113 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 S100A7AQ86SG5 101 aa10.8□□□□□ -0.68
NECTIN1-202ENST00000340882 IQCF2Q8IXL9 164 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms