RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 PSG8Q9UQ74 426 aa9.53□□□□□ -0.88
USP1-201ENST00000339950 A0A1B0GUT8 65 aa9.52□□□□□ -0.88
USP1-201ENST00000339950 CACNG7P62955 275 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 ASCL5Q7RTU5 278 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 FAM169BQ8N8A8 192 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 ZNF502Q8TBZ5 544 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 PRSS46E5RG02 174 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 BUB1B-PAK6H3BSN5 160 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 K7EMI3 77 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 PSG9Q00887 426 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 PRSS57Q6UWY2 283 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 RBPMS2Q6ZRY4 209 aaKnown RBP9.52□□□□□ -0.89
USP1-201ENST00000339950 OR1N2Q8NGR9 330 aa9.52□□□□□ -0.89
USP1-201ENST00000339950 B9A039 149 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 CEACAM3P40198 252 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 LINC00310P59036 64 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 HIST1H4GQ99525 98 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 G3V318 75 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 SAP30O75446 220 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 SCGB2A1O75556 95 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 DEFB1P60022 68 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 Q0VG73 95 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 ZNF418Q8TF45 676 aaPredicted RBP9.51□□□□□ -0.89
USP1-201ENST00000339950 NDFIP1Q9BT67 221 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 C21orf62Q9NYP8 219 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 IGLC7A0M8Q6 106 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 D6R8Y8 96 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 CGB3P0DN86 165 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 CGB7P0DN87 165 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 ZNF833PQ6ZTB9 187 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 CUBNO60494 3623 aa9.51□□□□□ -0.89
USP1-201ENST00000339950 MGPP08493 103 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 MFAP4P55083 255 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 GUSBP1Q15486 140 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 TMEM155Q4W5P6 130 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 ZNF414Q96IQ9 312 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
USP1-201ENST00000339950 OR10J3Q5JRS4 329 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 LYZL1Q6UWQ5 148 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 C11orf52Q96A22 123 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 C19orf24Q9BVV8 132 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 TRAV9-1A0A075B6T8 112 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 M0R381 172 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 NBR2O15453 112 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 C8orf46Q8TAG6 207 aa9.5□□□□□ -0.89
USP1-201ENST00000339950 TRAV30A0A087WSZ9 112 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 F5H697 171 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 GAGE1Q13065 139 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 JKAMPQ9P055 326 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 RABAC1Q9UI14 185 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 IGLV2-8P01709 118 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 GATA4P43694 442 aa9.49□□□□□ -0.89
USP1-201ENST00000339950 PSMB2P49721 201 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 MAPK1IP1LQ8NDC0 245 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 ARPC1AQ92747 370 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 COL25A1Q9BXS0 654 aaPredicted RBP9.48□□□□□ -0.89
USP1-201ENST00000339950 SYS1-DBNDD2H3BUS1 97 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 PF4V1P10720 104 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 NDUFB8O95169 186 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 MSRB1Q9NZV6 116 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 ZNF462Q96JM2 2506 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 SMIM13P0DJ93 91 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 TTTY13Q9BZ97 58 aa9.48□□□□□ -0.89
USP1-201ENST00000339950 A0A0G2JLM5 398 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 FAM106CPP0CH98 169 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 GATA1P15976 413 aaPredicted RBP9.47□□□□□ -0.89
USP1-201ENST00000339950 FAM106AQ4KMX7 169 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 SHISA9B4DS77 424 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 C15orf32Q32M92 178 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 FAM71F2Q6NXP2 309 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 SMIM27A0A1W2PRY6 76 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 VWC2LB2RUY7 222 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 ITGB1BP1O14713 200 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 FCN3O75636 299 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 CDSNQ15517 529 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 DUX5Q96PT3 197 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 LY96Q9Y6Y9 160 aa9.47□□□□□ -0.89
USP1-201ENST00000339950 A0A1B0GV72 72 aa9.46□□□□□ -0.89
USP1-201ENST00000339950 IGLC1P0CG04 106 aa9.46□□□□□ -0.89
USP1-201ENST00000339950 RHOGP84095 191 aa9.46□□□□□ -0.89
USP1-201ENST00000339950 IGFL2Q6UWQ7 119 aa9.46□□□□□ -0.89
USP1-201ENST00000339950 C16orf92Q96LL3 132 aa9.46□□□□□ -0.89
USP1-201ENST00000339950 APOMO95445 188 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 Q86TA4 180 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 IGHV1-24A0A0C4DH33 117 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 IGKV1-17P01599 117 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 TCF15Q12870 199 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 TMEM249Q2WGJ8 235 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 FAM120AOSQ5T036 256 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 TEX36Q5VZQ5 186 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 VMO1Q7Z5L0 202 aa9.46□□□□□ -0.9
USP1-201ENST00000339950 Q8NA96 180 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms