RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 hCG_2014768A0A024R1R8 64 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 C5orf51A6NDU8 294 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 H7BYZ3 331 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 LYRM1O43325 122 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 SNRPCP09234 159 aaKnown RBP7.51□□□□□ -1.21
CAPN3-202ENST00000337571 PVALBP20472 110 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-202ENST00000337571 CLINT1Q14677 625 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 C20orf144Q9BQM9 153 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 C20orf85Q9H1P6 137 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 DNAJC4Q9NNZ3 241 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 NOP10Q9NPE3 64 aaKnown RBP7.51□□□□□ -1.21
CAPN3-202ENST00000337571 ZNF331Q9NQX6 463 aaPredicted RBP7.51□□□□□ -1.21
CAPN3-202ENST00000337571 RCL1Q9Y2P8 373 aaKnown RBP7.51□□□□□ -1.21
CAPN3-202ENST00000337571 LSM5Q9Y4Y9 91 aaKnown RBP7.51□□□□□ -1.21
CAPN3-202ENST00000337571 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 DNAH2Q9P225 4427 aa7.51□□□□□ -1.21
CAPN3-202ENST00000337571 CAMLGP49069 296 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 CAV2P51636 162 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 DEFA1P59665 94 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 DEFA3P59666 94 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 GUK1Q16774 197 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 C12orf45Q8N5I9 185 aaPredicted RBP7.5□□□□□ -1.21
CAPN3-202ENST00000337571 OR1L4Q8NGR5 311 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 TMEM263Q8WUH6 116 aaKnown RBP7.5□□□□□ -1.21
CAPN3-202ENST00000337571 TMEM37Q8WXS4 190 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 PFDN5Q99471 154 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 MGST2Q99735 147 aa7.5□□□□□ -1.21
CAPN3-202ENST00000337571 TRAV6A0A075B6T7 132 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 SNURFLB1AK76 121 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
CAPN3-202ENST00000337571 CST7O76096 145 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 PRB4P10163 310 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-202ENST00000337571 ARL16Q0P5N6 197 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 OR5I1Q13606 314 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 UQCC1Q9NVA1 299 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 FAT2Q9NYQ8 4349 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 PKHD1P08F94 4074 aa7.49□□□□□ -1.21
CAPN3-202ENST00000337571 PKD1P98161 4303 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 PCLOQ9Y6V0 5065 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 DNAH17Q9UFH2 4485 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 PLAC8L1A1L4L8 177 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 H3BTX0 84 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 CCSO14618 274 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 RLN2P04090 185 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 TCRBP04435 133 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 S100A11P31949 105 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 LEPP41159 167 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 OPCMLQ14982 345 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 ZNF431Q8TF32 576 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-202ENST00000337571 C2orf50Q96LR7 162 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 MARVELD1Q9BSK0 173 aa7.48□□□□□ -1.21
CAPN3-202ENST00000337571 KIAA1109Q2LD37 5005 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 TRAV12-3A0A0B4J271 114 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 FAM24AA6NFZ4 105 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 H3BQ15 152 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 J3KRW8 73 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 IGLC2P0DOY2 106 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 S100A10P60903 97 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 HBG1P69891 147 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 HBG2P69892 147 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 BAXQ07812 192 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 CD300CQ08708 224 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 MIC13Q5XKP0 118 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 STX12Q86Y82 276 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 C6orf223Q8N319 242 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 RNASE8Q8TDE3 154 aaKnown RBP7.47□□□□□ -1.21
CAPN3-202ENST00000337571 CHAC2Q8WUX2 184 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 GNPNAT1Q96EK6 184 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-202ENST00000337571 NUDT15Q9NV35 164 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 TIMM9Q9Y5J7 89 aa7.47□□□□□ -1.21
CAPN3-202ENST00000337571 TRAV26-1A0A087WT03 109 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 TRAV5A0A0B4J249 113 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 FAM240BA0A1B0GVZ2 78 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 GAGE12BA1L429 117 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 SLC17A3O00476 420 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 GAGE7O76087 117 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 GAGE12FP0CL80 117 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 GAGE12GP0CL81 117 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 GAGE12IP0CL82 117 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 M6PRP20645 277 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 RPL29P47914 159 aaKnown RBP7.46□□□□□ -1.22
CAPN3-202ENST00000337571 SULT1A1P50225 295 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 ATP6V1FQ16864 119 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 GFI1BQ5VTD9 330 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 MZT2BQ6NZ67 158 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 SSX7Q7RTT5 188 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 ZNRF2Q8NHG8 242 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 RNF141Q8WVD5 230 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 SAT2Q96F10 170 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-202ENST00000337571 PYGO2Q9BRQ0 406 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 PARD6GQ9BYG4 376 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-202ENST00000337571 SLC39A9Q9NUM3 307 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 WDR83OSQ9Y284 106 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 LINC00588Q9Y4M8 146 aa7.46□□□□□ -1.22
CAPN3-202ENST00000337571 UBE2L5PA0A1B0GUS4 154 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms