RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 ZNF542PQ5EBM4 170 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 C10orf105Q8TEF2 133 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 ITLN1Q8WWA0 313 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
TDP1-201ENST00000335725 H0YIG0 161 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 FAM27E3Q08E93 113 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 VMA21Q3ZAQ7 101 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 C1orf159Q96HA4 380 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 METTL26Q96S19 204 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 RPUSD1Q9UJJ7 312 aaKnown RBP6.77□□□□□ -1.33
TDP1-201ENST00000335725 TMEM178BH3BS89 294 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 DAZAP2Q15038 168 aaPredicted RBP6.77□□□□□ -1.33
TDP1-201ENST00000335725 C5orf38Q86SI9 138 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 LINC00311Q8N616 119 aa6.77□□□□□ -1.33
TDP1-201ENST00000335725 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 ZNF815PA8K554 130 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 CRIP2P52943 208 aaPredicted RBP6.76□□□□□ -1.33
TDP1-201ENST00000335725 PCBD1P61457 104 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 CRYGSP22914 178 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 DUTP33316 252 aaKnown RBP6.76□□□□□ -1.33
TDP1-201ENST00000335725 LINC00322Q6ZN03 302 aaPredicted RBP6.76□□□□□ -1.33
TDP1-201ENST00000335725 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 Q8N8P6 123 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 SRSF12Q8WXF0 261 aaKnown RBP6.76□□□□□ -1.33
TDP1-201ENST00000335725 PRDM14Q9GZV8 571 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 TPSG1Q9NRR2 321 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 C17orf98A8MV24 154 aa6.76□□□□□ -1.33
TDP1-201ENST00000335725 RSPO2Q6UXX9 243 aaPredicted RBP6.76□□□□□ -1.33
TDP1-201ENST00000335725 TRAV41A0A0B4J266 112 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 CFC1BP0CG36 223 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 CFC1P0CG37 223 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 CD52P31358 61 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 C20orf204Q6ZNR8 217 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 FAM167A-AS1Q96KT0 104 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 RETNQ9HD89 108 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 DYNLRB1Q9NP97 96 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 NDUFA3O95167 84 aa6.75□□□□□ -1.33
TDP1-201ENST00000335725 FKBP2P26885 142 aaKnown RBP6.75□□□□□ -1.33
TDP1-201ENST00000335725 HIST1H4AP62805 103 aaKnown RBP6.75□□□□□ -1.33
TDP1-201ENST00000335725 RPL18AQ02543 176 aaKnown RBP6.75□□□□□ -1.33
TDP1-201ENST00000335725 COX7A2P2O60397 106 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
TDP1-201ENST00000335725 IL17DQ8TAD2 202 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 PEMTQ9UBM1 199 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 F8VRH5 84 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 ZNF883P0CG24 379 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 SLC25A16P16260 332 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 LOXL3P58215 753 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 Q1RN00 199 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 BRK1Q8WUW1 75 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 TRAV12-1A0A0B4J245 112 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 A0A0G2JNJ9 132 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 A0A0U1RQV1 116 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 NEXN-AS1Q8NBZ9 246 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 PHPT1Q9NRX4 125 aaPredicted RBP6.74□□□□□ -1.33
TDP1-201ENST00000335725 Q9UFV3 132 aa6.74□□□□□ -1.33
TDP1-201ENST00000335725 A0A0B4J2C4 111 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 IGHV4-39P01824 125 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 COX6CP09669 75 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 C16orf92Q96LL3 132 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 C10orf128Q5T292 105 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 C10orf113Q5VZT2 155 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 ZNF714Q96N38 554 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 MYOFQ9NZM1 2061 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 CCL16O15467 120 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 LYZL6O75951 148 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 ELANEP08246 267 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 SYNJ2BPP57105 145 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 EIF4EBP1Q13541 118 aaPredicted RBP6.73□□□□□ -1.33
TDP1-201ENST00000335725 PMAIP1Q13794 54 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 PLXDC1Q8IUK5 500 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 MYO7AQ13402 2215 aa6.73□□□□□ -1.33
TDP1-201ENST00000335725 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
TDP1-201ENST00000335725 TGFBR3LH3BV60 316 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 TCF15Q12870 199 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 ZNF497Q6ZNH5 498 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 WFDC11Q8NEX6 87 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 WISP1O95388 367 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 IGHV3-33P01772 117 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 ZNF22P17026 224 aaPredicted RBP6.72□□□□□ -1.33
TDP1-201ENST00000335725 CD164Q04900 197 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 FAM182BQ5T319 152 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 CLPSP04118 112 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 TCRAP04437 139 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 TMEM200BQ69YZ2 307 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 UPK3BQ9BT76 320 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 OTORQ9NRC9 128 aa6.72□□□□□ -1.33
TDP1-201ENST00000335725 TRBV30A0A0K0K1B3 111 aa6.71□□□□□ -1.33
TDP1-201ENST00000335725 SPINT2O43291 252 aa6.71□□□□□ -1.33
TDP1-201ENST00000335725 FXYD5Q96DB9 178 aa6.71□□□□□ -1.33
TDP1-201ENST00000335725 TRBV6-1A0A0K0K1D8 114 aa6.71□□□□□ -1.34
TDP1-201ENST00000335725 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
TDP1-201ENST00000335725 Q86TA4 180 aa6.71□□□□□ -1.34
TDP1-201ENST00000335725 LINC01561Q8N1V8 128 aa6.71□□□□□ -1.34
TDP1-201ENST00000335725 A0A0C4DFX4 3053 aa6.71□□□□□ -1.34
TDP1-201ENST00000335725 A8MZ25 164 aa6.71□□□□□ -1.34
TDP1-201ENST00000335725 TDHQ8IZJ6 230 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms