RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TAGLN2P37802 199 aaKnown RBP16.05■□□□□ 0.16
TPM1-204ENST00000334895 PSG3Q16557 428 aa16.05■□□□□ 0.16
TPM1-204ENST00000334895 OXLD1Q5BKU9 147 aa16.05■□□□□ 0.16
TPM1-204ENST00000334895 SLC25A5P05141 298 aaKnown RBP16.05■□□□□ 0.16
TPM1-204ENST00000334895 C5orf17Q8NAS9 161 aa16.05■□□□□ 0.16
TPM1-204ENST00000334895 LINC00052Q96N35 136 aa16.05■□□□□ 0.16
TPM1-204ENST00000334895 PRAC2D3DTV9 90 aa16.04■□□□□ 0.16
TPM1-204ENST00000334895 ID1P41134 155 aa16.04■□□□□ 0.16
TPM1-204ENST00000334895 DEFB1P60022 68 aa16.04■□□□□ 0.16
TPM1-204ENST00000334895 BEAN1Q3B7T3 259 aa16.04■□□□□ 0.16
TPM1-204ENST00000334895 TXNDC17Q9BRA2 123 aa16.04■□□□□ 0.16
TPM1-204ENST00000334895 PSMG4Q5JS54 123 aa16.03■□□□□ 0.16
TPM1-204ENST00000334895 MRPL53Q96EL3 112 aaKnown RBP16.03■□□□□ 0.16
TPM1-204ENST00000334895 EPDR1Q9UM22 224 aa16.03■□□□□ 0.16
TPM1-204ENST00000334895 SCO2A0A1W2PP80 73 aa16.02■□□□□ 0.16
TPM1-204ENST00000334895 SNRPD3P62318 126 aaKnown RBP16.02■□□□□ 0.16
TPM1-204ENST00000334895 ODF3L2Q3SX64 289 aa16.02■□□□□ 0.16
TPM1-204ENST00000334895 MAP6D1Q9H9H5 199 aa16.02■□□□□ 0.16
TPM1-204ENST00000334895 CLEC5AQ9NY25 188 aa16.02■□□□□ 0.16
TPM1-204ENST00000334895 RPH3ALQ9UNE2 315 aa16.02■□□□□ 0.16
TPM1-204ENST00000334895 PRELID1Q9Y255 219 aa16.02■□□□□ 0.16
TPM1-204ENST00000334895 TCRAP04437 139 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 SRP19P09132 144 aaKnown RBP16.01■□□□□ 0.15
TPM1-204ENST00000334895 CMTM2Q8TAZ6 248 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 RPUSD4Q96CM3 377 aaKnown RBP16.01■□□□□ 0.15
TPM1-204ENST00000334895 FBN3Q75N90 2809 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 DIRC3C9JPN6 131 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 PEA15Q15121 130 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 SLC7A5P1Q8MH63 180 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 EIF4E3Q8N5X7 224 aaKnown RBP16.01■□□□□ 0.15
TPM1-204ENST00000334895 ZNF738Q8NE65 137 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 C11orf52Q96A22 123 aa16.01■□□□□ 0.15
TPM1-204ENST00000334895 PEX7O00628 323 aa16■□□□□ 0.15
TPM1-204ENST00000334895 PDE6DO43924 150 aa16■□□□□ 0.15
TPM1-204ENST00000334895 CD7P09564 240 aa16■□□□□ 0.15
TPM1-204ENST00000334895 DEFB131AP59861 70 aa16■□□□□ 0.15
TPM1-204ENST00000334895 TCEAL7Q9BRU2 100 aa16■□□□□ 0.15
TPM1-204ENST00000334895 IGKV2-40A0A087WW87 121 aaPredicted RBP15.99■□□□□ 0.15
TPM1-204ENST00000334895 F6UB75 175 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 F6UZH7 168 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 IGKV2D-40P01614 121 aaPredicted RBP15.99■□□□□ 0.15
TPM1-204ENST00000334895 ARL6IP6Q8N6S5 226 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 CYB561D1Q8N8Q1 229 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 C2CD4CQ8TF44 421 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 HIST1H2BAQ96A08 127 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 LINC00479Q96M42 142 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 ATG101Q9BSB4 218 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 SMDT1Q9H4I9 107 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 C19orf73Q9NVV2 129 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 ZMAT5Q9UDW3 170 aaKnown RBP15.99■□□□□ 0.15
TPM1-204ENST00000334895 NBEAL1Q6ZS30 2694 aa15.99■□□□□ 0.15
TPM1-204ENST00000334895 NDUFS6O75380 124 aaKnown RBP15.98■□□□□ 0.15
TPM1-204ENST00000334895 CSN1S1P47710 185 aa15.98■□□□□ 0.15
TPM1-204ENST00000334895 ZNF124Q15973 351 aa15.98■□□□□ 0.15
TPM1-204ENST00000334895 GOLT1AQ6ZVE7 132 aa15.98■□□□□ 0.15
TPM1-204ENST00000334895 DERL1Q9BUN8 251 aa15.98■□□□□ 0.15
TPM1-204ENST00000334895 TREM1Q9NP99 234 aa15.98■□□□□ 0.15
TPM1-204ENST00000334895 G3V4G9 280 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 TMEM250H0YL14 139 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 ZNF705DP0CH99 300 aaPredicted RBP15.97■□□□□ 0.15
TPM1-204ENST00000334895 ZNF705BP0CI00 300 aaPredicted RBP15.97■□□□□ 0.15
TPM1-204ENST00000334895 GDF5OSQ5U4N7 250 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 UQCC3Q6UW78 93 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 EGFEM1PQ0D2K5 195 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 SAMD5Q5TGI4 173 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 APRG1Q8IVJ8 170 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 VGLL1Q99990 258 aa15.97■□□□□ 0.15
TPM1-204ENST00000334895 TRAV8-1A0A0A6YYK1 113 aa15.96■□□□□ 0.15
TPM1-204ENST00000334895 IGLV2-11P01706 119 aa15.96■□□□□ 0.15
TPM1-204ENST00000334895 KRTAP10-11P60412 298 aa15.96■□□□□ 0.15
TPM1-204ENST00000334895 SGK494Q96LW2 274 aa15.96■□□□□ 0.15
TPM1-204ENST00000334895 AGRNO00468 2067 aa15.95■□□□□ 0.14
TPM1-204ENST00000334895 TRAV34A0A0B4J273 112 aa15.95■□□□□ 0.14
TPM1-204ENST00000334895 CMC4P56277 68 aaPredicted RBP15.95■□□□□ 0.14
TPM1-204ENST00000334895 NDUFA5Q16718 116 aa15.95■□□□□ 0.14
TPM1-204ENST00000334895 OR8A1Q8NGG7 326 aa15.95■□□□□ 0.14
TPM1-204ENST00000334895 WFDC10AQ9H1F0 79 aa15.95■□□□□ 0.14
TPM1-204ENST00000334895 SLC35B3Q9H1N7 401 aa15.95■□□□□ 0.14
TPM1-204ENST00000334895 KNCNA6PVL3 124 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 OR11H12B2RN74 326 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 AKR1C3P42330 323 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 CEBPGP53567 150 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 ERCC8Q13216 396 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 FAM110AQ9BQ89 295 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 SAV1Q9H4B6 383 aaPredicted RBP15.94■□□□□ 0.14
TPM1-204ENST00000334895 KLF12Q9Y4X4 402 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 A0A0J9YX75 114 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 FOXI2Q6ZQN5 318 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 CITED4Q96RK1 184 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 AGPAT4-IT1Q9H0P7 198 aa15.94■□□□□ 0.14
TPM1-204ENST00000334895 SERTM2A0A1B0GWG4 89 aa15.93■□□□□ 0.14
TPM1-204ENST00000334895 RBAKDNA6NC62 111 aa15.93■□□□□ 0.14
TPM1-204ENST00000334895 SFTA3P0C7M3 94 aa15.93■□□□□ 0.14
TPM1-204ENST00000334895 RPL35P42766 123 aaKnown RBP15.93■□□□□ 0.14
TPM1-204ENST00000334895 HIST1H1AQ02539 215 aaPredicted RBP15.93■□□□□ 0.14
TPM1-204ENST00000334895 ASCL2Q99929 193 aa15.93■□□□□ 0.14
TPM1-204ENST00000334895 PARLQ9H300 379 aa15.93■□□□□ 0.14
TPM1-204ENST00000334895 NOTCH1P46531 2555 aa15.92■□□□□ 0.14
TPM1-204ENST00000334895 NPIPB6E9PJ23 425 aa15.92■□□□□ 0.14
TPM1-204ENST00000334895 TMEM183BQ1AE95 376 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms