RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MGAT4CQ9UBM8 478 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MTFP1Q9UDX5 166 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR14J1Q9UGF5 321 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OAZ3Q9UMX2 235 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ZFP30Q9Y2G7 519 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 GSTK1Q9Y2Q3 226 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR2W1Q9Y3N9 320 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 V9GY05 133 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 GVQW2A0A096LPI5 108 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 IGHV3-15A0A0B4J1V0 119 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TRBV6-4A0A1B0GX49 114 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TVP23AA6NH52 213 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 UPK2O00526 184 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MYL12BO14950 172 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 FABP7O15540 132 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 KBTBD11O94819 623 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 DIRAS1O95057 198 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR13C7P0DN81 318 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF93P35789 620 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LINC00315P59091 139 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 AP3S2P59780 193 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 PLA2G7Q13093 441 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CATR1Q13166 79 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR2F1Q13607 317 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ATXN7L3Q14CW9 347 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TAF13Q15543 124 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ATP6V1FQ16864 119 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 RTL8BQ17RB0 113 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ABCA11PQ4W5N1 156 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 VKORC1L1Q8N0U8 176 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 DEFB125Q8N687 156 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SAMD12Q8N8I0 201 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR2G3Q8NGZ4 309 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR8S1Q8NH09 359 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 OR4X1Q8NH49 305 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 MPLKIPQ8TAP9 179 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 SMIM4Q8WVI0 70 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 DIRC1Q969H9 104 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LINC00052Q96N35 136 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 CIB3Q96Q77 187 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 NKX3-1Q99801 234 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 TXNDC17Q9BRA2 123 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 NKX6-2Q9C056 277 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 GTSF1LQ9H1H1 148 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF430Q9H8G1 570 aaPredicted RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 STRAPQ9Y3F4 350 aaKnown RBP0.93□□□□□ -2.26
LINC00643-201ENST00000334389 LY96Q9Y6Y9 160 aa0.93□□□□□ -2.26
LINC00643-201ENST00000334389 BORCS7-ASMTA0A0B4J1R7 106 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 A0A1B0GWB2 263 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 A0A1W2PQ09 198 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 ANKRD20A5PA0PJZ0 165 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 ZFP92A6NM28 416 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 B5MCH6 92 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 H3BN98 237 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 NUPL2O15504 423 aaKnown RBP0.92□□□□□ -2.26
LINC00643-201ENST00000334389 RGS5O15539 181 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 BCE1O60756 84 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 MED6O75586 246 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 APOA2P02652 100 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 CT45A6P0DMU7 189 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 CT45A5P0DMU8 189 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 CT45A7P0DMV0 189 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 ZNF44P15621 663 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 GPR183P32249 361 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 TAGLN2P37802 199 aaKnown RBP0.92□□□□□ -2.26
LINC00643-201ENST00000334389 RPL29P47914 159 aaKnown RBP0.92□□□□□ -2.26
LINC00643-201ENST00000334389 AKR1D1P51857 326 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 OR10A3P58181 314 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 DEFA1P59665 94 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 DEFA3P59666 94 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 RANP62826 216 aaKnown RBP0.92□□□□□ -2.26
LINC00643-201ENST00000334389 RPP30P78346 268 aaKnown RBP0.92□□□□□ -2.26
LINC00643-201ENST00000334389 ODF4Q2M2E3 257 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 VMA21Q3ZAQ7 101 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 ZFP69Q49AA0 526 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 CT45A1Q5HYN5 189 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 SPANXN2Q5MJ10 180 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 IDNKQ5T6J7 187 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 TRIQKQ629K1 86 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 OR2T2Q6IF00 324 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 PLET1Q6UQ28 207 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 RBPMS2Q6ZRY4 209 aaKnown RBP0.92□□□□□ -2.26
LINC00643-201ENST00000334389 FAM57BQ71RH2 274 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 TMEM144Q7Z5S9 345 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 CBR4Q8N4T8 237 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 FAM216BQ8N7L0 139 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 TCEANCQ8N8B7 351 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 NUP35Q8NFH5 326 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 OR10K1Q8NGX5 313 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 OR6N2Q8NGY6 317 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 OR52I2Q8NH67 350 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 CT45A3Q8NHU0 189 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 OR51E1Q8TCB6 317 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 HIST1H2BAQ96A08 127 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 GALMQ96C23 342 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 NUDT11Q96G61 164 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 AQP10Q96PS8 301 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 PFDN5Q99471 154 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 S100A13Q99584 98 aa0.92□□□□□ -2.26
LINC00643-201ENST00000334389 SELENOIQ9C0D9 397 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms