RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 RFNGQ9Y644 331 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 TNRC6BQ9UPQ9 1833 aaKnown RBP13.36□□□□□ -0.27
PTCH1-201ENST00000331920 A0A1B0GWJ7 208 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 FAM223BA6NKX1 122 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 C4orf48Q5BLP8 95 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 FAM223AQ8IWN6 122 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 LYZL4Q96KX0 146 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 GNLYP22749 145 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 NYNRINQ9P2P1 1898 aaKnown RBP13.36□□□□□ -0.27
PTCH1-201ENST00000331920 APOC4P55056 127 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 ZNF362Q5T0B9 420 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-201ENST00000331920 RUSC1-AS1Q66K80 236 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 CFHR4Q92496 578 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 TRGV9Q99603 122 aa13.36□□□□□ -0.27
PTCH1-201ENST00000331920 COL22A1Q8NFW1 1626 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-201ENST00000331920 USMG5Q96IX5 58 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 LY6HO94772 140 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 FOXF2Q12947 444 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 ATRXP46100 2492 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 K7ERJ3 54 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 SHANK1Q9Y566 2161 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 TRAV13-2A0A0B4J235 113 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 B4DSR2 109 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 NDUFS6O75380 124 aaKnown RBP13.35□□□□□ -0.27
PTCH1-201ENST00000331920 Q6ZQT7 251 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 A0A0J9YY99 117 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 OVOL3O00110 214 aa13.35□□□□□ -0.27
PTCH1-201ENST00000331920 BUB3O43684 328 aa13.34□□□□□ -0.27
PTCH1-201ENST00000331920 SPTSSBQ8NFR3 76 aa13.34□□□□□ -0.27
PTCH1-201ENST00000331920 TMEM213A2RRL7 107 aa13.34□□□□□ -0.27
PTCH1-201ENST00000331920 PPDPFLQ8WWR9 84 aa13.34□□□□□ -0.27
PTCH1-201ENST00000331920 LINC00479Q96M42 142 aa13.34□□□□□ -0.27
PTCH1-201ENST00000331920 DAZ1Q9NQZ3 744 aaKnown RBP13.34□□□□□ -0.27
PTCH1-201ENST00000331920 SIGLEC9Q9Y336 463 aa13.34□□□□□ -0.27
PTCH1-201ENST00000331920 BUB1B-PAK6H3BSN5 160 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 TAF1LQ8IZX4 1826 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 E9PQ18 207 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 HGFACQ04756 655 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 CSRP2Q16527 193 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 LINC01356Q8N9X3 169 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 ACYP1P07311 99 aa13.33□□□□□ -0.28
PTCH1-201ENST00000331920 RNF223E7ERA6 249 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 LINC01551Q86U37 167 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 WNK3Q9BYP7 1800 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 A0A0A6YYD4 124 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 SLAQ13239 276 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 FAM181AQ8N9Y4 354 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 NHSQ6T4R5 1651 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 LINC00205P59089 165 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 C5orf64Q2M2E5 130 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 EFNA2O43921 213 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 BOD1L2Q8IYS8 172 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 SPANXA1Q9NS26 97 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 SAA4P35542 130 aa13.32□□□□□ -0.28
PTCH1-201ENST00000331920 ZNF503Q96F45 646 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 LINC00271P0C7V0 271 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 EFNA4P52798 201 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 CTHRC1Q96CG8 243 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 SPACA3Q8IXA5 215 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 TMEM141Q96I45 108 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 PCNX1Q96RV3 2341 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 A0A087WW49 117 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 H3BMG7 143 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 SMIM10L1P0DMW3 83 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 SMIM10Q96HG1 83 aa13.31□□□□□ -0.28
PTCH1-201ENST00000331920 SHISA3A0PJX4 238 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 LINC01619G3V211 115 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 FUSP35637 526 aaKnown RBP eCLIP13.3□□□□□ -0.28
PTCH1-201ENST00000331920 TMEM178BH3BS89 294 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 BRK1Q8WUW1 75 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 A0A087WV48 116 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 ETDCA0A1B0GVM5 59 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 NDUFA12Q9UI09 145 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 H0YJW9 148 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 ANKRD39Q53RE8 183 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 MINOS1Q5TGZ0 78 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 MINOS1-NBL1R4GNA1 71 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 CACNA1EQ15878 2313 aa13.3□□□□□ -0.28
PTCH1-201ENST00000331920 EPOPA6NHQ4 379 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 ETDBQ3ZM63 59 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 CEND1Q8N111 149 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 RPP25LQ8N5L8 163 aaKnown RBP13.29□□□□□ -0.28
PTCH1-201ENST00000331920 PROP1O75360 226 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 C9orf118A6NHY6 69 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 UBE2E1P51965 193 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 FBLIM1Q8WUP2 373 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 NDUFB1O75438 58 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 F8W1H4 67 aa13.29□□□□□ -0.28
PTCH1-201ENST00000331920 NTF4P34130 210 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 TIRAPP58753 221 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 MP68P56378 58 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 BPESC1Q9GZL8 116 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 PRO1854Q9UHT4 67 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 B5MCH6 92 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 MLANAQ16655 118 aa13.28□□□□□ -0.28
PTCH1-201ENST00000331920 C1orf53Q5VUE5 145 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms