RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 Q5PR19 223 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 NPFFR1Q9GZQ6 430 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 FAM215AQ9Y5M1 114 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 ORM1P02763 201 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 CRYGCP07315 174 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 APOBEC3AP31941 199 aaPredicted RBP11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 SCNM1Q9BWG6 230 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 AKAP13Q12802 2813 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 OVOL3O00110 214 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 SH2D1AO60880 128 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 NCOR1P1Q9H4R4 102 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
CHRNA3-201ENST00000326828 C17orf100A8MU93 164 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 NDUFS7O75251 213 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 HLA-DMBP28068 263 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 ADAMTSL5Q6ZMM2 481 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 AMTNQ6UX39 209 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 SIGLEC15Q6ZMC9 328 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 DEFB123Q8N688 67 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 DYNLRB1Q9NP97 96 aa11.27□□□□□ -0.61
CHRNA3-201ENST00000326828 CEP295Q9C0D2 2601 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 SPAARA0A1B0GVQ0 90 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 IGHV1-8P0DP01 117 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 LOXP28300 417 aaPredicted RBP11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 MC5RP33032 325 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 LEPP41159 167 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 LGALS7P47929 136 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 TMEM160Q9NX00 188 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 AGRNO00468 2067 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 ADIPOQQ15848 244 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 TEX36Q5VZQ5 186 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 AAMDCQ9H7C9 122 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 COL27A1Q8IZC6 1860 aaPredicted RBP11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 BSPH1Q075Z2 132 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 RNF125Q96EQ8 232 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 ABHD17AQ96GS6 310 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 FOXC2Q99958 501 aa11.26□□□□□ -0.61
CHRNA3-201ENST00000326828 HES1Q14469 280 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 LGALS9BQ3B8N2 356 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 RPEQ96AT9 228 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 IGHV3OR16-13A0A075B7E8 117 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 IGHV3-74A0A0B4J1X5 117 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 INS-IGF2F8WCM5 200 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 TMEM178BH3BS89 294 aa11.25□□□□□ -0.61
CHRNA3-201ENST00000326828 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 TEX22C9J3V5 150 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 TMEM108Q6UXF1 575 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 SH2D6Q7Z4S9 175 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 MBD3L4A6NDZ8 208 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 MBD3L3A6NE82 208 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 MBD3L5A6NJ08 208 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 AZU1P20160 251 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 OR9G4Q8NGQ1 327 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 MBD3L2Q8NHZ7 208 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 COL25A1Q9BXS0 654 aaPredicted RBP11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 WFDC2Q14508 124 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 OR4X2Q8NGF9 303 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 SHANK2-AS3Q9BTD1 123 aa11.24□□□□□ -0.61
CHRNA3-201ENST00000326828 IGHV1-3A0A0C4DH29 117 aa11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 IGHV3-66A0A0C4DH42 116 aa11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 ZNF80P51504 273 aaPredicted RBP11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 VGLL1Q99990 258 aa11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 CHAC1Q9BUX1 264 aa11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 ZC2HC1BQ5TFG8 222 aa11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 NEGR1Q7Z3B1 354 aa11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
CHRNA3-201ENST00000326828 H3BMG7 143 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 I3L2K1 104 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 K7EM74 188 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 OTOGLQ3ZCN5 2332 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 ZNF491Q8N8L2 437 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 KLK15Q9H2R5 256 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 TMEM30BQ3MIR4 351 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 ETDBQ3ZM63 59 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 DEFB104AQ8WTQ1 72 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 TLN1Q9Y490 2541 aaKnown RBP11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 ZNF883P0CG24 379 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 FAM169BQ8N8A8 192 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 DEFB124Q8NES8 71 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
CHRNA3-201ENST00000326828 ERCC8Q13216 396 aa11.21□□□□□ -0.61
CHRNA3-201ENST00000326828 ONECUT1Q9UBC0 465 aa11.21□□□□□ -0.61
CHRNA3-201ENST00000326828 TRAV26-2A0A0B4J265 109 aa11.21□□□□□ -0.62
CHRNA3-201ENST00000326828 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.62
CHRNA3-201ENST00000326828 K7EIM0 57 aa11.21□□□□□ -0.62
CHRNA3-201ENST00000326828 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.62
CHRNA3-201ENST00000326828 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 J3KRW8 73 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 UFC1Q9Y3C8 167 aa11.2□□□□□ -0.62
CHRNA3-201ENST00000326828 H3BRN7 92 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms