RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 NPFFR1Q9GZQ6 430 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 ZFP30Q9Y2G7 519 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 SMKR1H3BMG3 65 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 ZFP36P26651 326 aaKnown RBP9.41□□□□□ -0.9
DDR1-223ENST00000324771 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 NCOR1P1Q9H4R4 102 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 LAMTOR2Q9Y2Q5 125 aa9.41□□□□□ -0.9
DDR1-223ENST00000324771 TRBV9A0A0B4J1U6 114 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 OR4X2Q8NGF9 303 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 H3BVH4 76 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 IGLC1P0CG04 106 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 UBE2E1P51965 193 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 TMEM95Q3KNT9 176 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
DDR1-223ENST00000324771 IGHV2-70DA0A0C4DH43 119 aa9.4□□□□□ -0.91
DDR1-223ENST00000324771 MSMBP08118 114 aa9.4□□□□□ -0.91
DDR1-223ENST00000324771 ZNF56Q15929 161 aa9.4□□□□□ -0.91
DDR1-223ENST00000324771 POU2AF1Q16633 256 aa9.4□□□□□ -0.91
DDR1-223ENST00000324771 RNASE8Q8TDE3 154 aaKnown RBP9.4□□□□□ -0.91
DDR1-223ENST00000324771 RNF5Q99942 180 aa9.4□□□□□ -0.91
DDR1-223ENST00000324771 J3QR89 54 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
DDR1-223ENST00000324771 LYZL1Q6UWQ5 148 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
DDR1-223ENST00000324771 MEGF9Q9H1U4 602 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 LSM4Q9Y4Z0 139 aaKnown RBP9.39□□□□□ -0.91
DDR1-223ENST00000324771 NBEAQ8NFP9 2946 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 C19orf84I3L1E1 186 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 SPRY2O43597 315 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 C1orf194Q5T5A4 169 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 FCN3O75636 299 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 NIT1Q86X76 327 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 TMEM75Q8N9X5 138 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 RAB37Q96AX2 223 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
DDR1-223ENST00000324771 SIGLEC15Q6ZMC9 328 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 C8orf49Q96NF6 230 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 ZNF324O75467 553 aaPredicted RBP9.38□□□□□ -0.91
DDR1-223ENST00000324771 CGB3P0DN86 165 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 CGB7P0DN87 165 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 Q6ZVH6 145 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 SHANK2-AS3Q9BTD1 123 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 C11orf1Q9H5F2 150 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 IGHV4-30-2A0A087WSY4 118 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 CD7P09564 240 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 ARMS2P0C7Q2 107 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 FRMD6-AS1P0C7T7 363 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 TMEM160Q9NX00 188 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 HECTD1Q9ULT8 2610 aa9.38□□□□□ -0.91
DDR1-223ENST00000324771 K7EN84 100 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 PLP1P60201 277 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 PATE2Q6UY27 113 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 PRSS22Q9GZN4 317 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 ZNF256Q9Y2P7 627 aaPredicted RBP9.37□□□□□ -0.91
DDR1-223ENST00000324771 IGHV1-69DA0A0B4J2H0 117 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 IGHV1-69P01742 117 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 IGHV4-39P01824 125 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 BLCAPP62952 87 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 Q8N7P7 452 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 GNB1LQ9BYB4 327 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 OOSP1A8MZH6 123 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 EMP1P54849 157 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
DDR1-223ENST00000324771 AMN1Q8IY45 258 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 ORMDL3Q8N138 153 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 TRAV8-6A0A0B4J262 113 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 IGHV4-38-2P0DP08 117 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 SYNJ2BPP57105 145 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 FXYD5Q96DB9 178 aa9.37□□□□□ -0.91
DDR1-223ENST00000324771 TMEM213A2RRL7 107 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 F2Z2F3 143 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 ACTL10Q5JWF8 245 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 TOMM40O96008 361 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 ANKRD17O75179 2603 aaKnown RBP9.36□□□□□ -0.91
DDR1-223ENST00000324771 D6R8Y8 96 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 SH2D1AO60880 128 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 IGKV1-17P01599 117 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 IGLV1-47P01700 117 aa9.36□□□□□ -0.91
DDR1-223ENST00000324771 ASIPP42127 132 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDR1-223ENST00000324771 Q86TA4 180 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 ZNF491Q8N8L2 437 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 EXPH5Q8NEV8 1989 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 Q1RN00 199 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 JKAMPQ9P055 326 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 FRYQ5TBA9 3013 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 PSG3Q16557 428 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 DUX3Q96PT4 197 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 SLC50A1Q9BRV3 221 aa9.35□□□□□ -0.91
DDR1-223ENST00000324771 POLR3KQ9Y2Y1 108 aaPredicted RBP9.35□□□□□ -0.91
DDR1-223ENST00000324771 TRBV19A0A075B6N1 114 aa9.34□□□□□ -0.91
DDR1-223ENST00000324771 PSMB11A5LHX3 300 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms