RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 MAP1LC3B2A6NCE7 125 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 F6UZH7 168 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 PHOX2AO14813 284 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 MT-CO2P00403 227 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 IGHG2P01859 326 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 EGR2P11161 476 aaPredicted RBP4.91□□□□□ -1.62
CSTF3-201ENST00000323959 CDC34P49427 236 aaPredicted RBP4.91□□□□□ -1.62
CSTF3-201ENST00000323959 MFAP2P55001 183 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 SLC35E3Q7Z769 313 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 STXBP6Q8NFX7 210 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 MAP1LC3BQ9GZQ8 125 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 TMEM14CQ9P0S9 112 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 FUT9Q9Y231 359 aa4.91□□□□□ -1.62
CSTF3-201ENST00000323959 IGKV1OR2-108A0A075B7D4 117 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 PDE6DO43924 150 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 TMEM11P17152 192 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 ZNF674Q2M3X9 581 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 PQLC2Q6ZP29 291 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 SSX7Q7RTT5 188 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 S100A7AQ86SG5 101 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 STPG3Q8N7X2 389 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 C5orf56Q8N8D9 126 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 ARPC1AQ92747 370 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 DLX4Q92988 240 aaPredicted RBP4.9□□□□□ -1.62
CSTF3-201ENST00000323959 PACRGQ96M98 296 aaPredicted RBP4.9□□□□□ -1.62
CSTF3-201ENST00000323959 TMEM208Q9BTX3 173 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 FNDC4Q9H6D8 234 aaPredicted RBP4.9□□□□□ -1.62
CSTF3-201ENST00000323959 VSIRQ9H7M9 311 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 SRD5A3Q9H8P0 318 aa4.9□□□□□ -1.62
CSTF3-201ENST00000323959 IGHV7-81A0A0B4J1V7 117 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 EREGO14944 169 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 SPRY2O43597 315 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BKO60814 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 GCGP01275 180 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 IGHG4P01861 327 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BJP06899 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 SNRPCP09234 159 aaKnown RBP4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BOP23527 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 S100A7P31151 101 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BBP33778 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BDP58876 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BCP62807 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 MMDQ15546 238 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 TNXAQ16473 311 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST2H2BEQ16778 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.9□□□□□ -1.63
CSTF3-201ENST00000323959 Q6ZWC4 215 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF664Q8N3J9 261 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 OR10W1Q8NGF6 305 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BHQ93079 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 RPUSD4Q96CM3 377 aaKnown RBP4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BNQ99877 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BMQ99879 126 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 ATG101Q9BSB4 218 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 TMEM167BQ9NRX6 74 aa4.9□□□□□ -1.63
CSTF3-201ENST00000323959 TRBV6-1A0A0K0K1D8 114 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 IGLL5B9A064 214 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 LINC01619G3V211 115 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 K7EIM0 57 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 HMGB3O15347 200 aaKnown RBP4.89□□□□□ -1.63
CSTF3-201ENST00000323959 ACTL6BO94805 426 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 TOMM40O96008 361 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 OR13C7P0DN81 318 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 FABP4P15090 132 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 TAS2R45P59539 299 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 SMIM12Q96EX1 92 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 SNHG12Q9BXW3 62 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 FBXL15Q9H469 300 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 A0A1W2PRE2 83 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 SCGB2A1O75556 95 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 IGLC1P0CG04 106 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 MYOD1P15172 320 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 CCL20P78556 96 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 MEF2BQ02080 365 aaPredicted RBP4.89□□□□□ -1.63
CSTF3-201ENST00000323959 FXYD3Q14802 87 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 FANCD2OSQ96PS1 177 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 C11orf68Q9H3H3 251 aaKnown RBP4.89□□□□□ -1.63
CSTF3-201ENST00000323959 THYN1Q9P016 225 aa4.89□□□□□ -1.63
CSTF3-201ENST00000323959 A0A1W2PPQ1 181 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 FAM223BA6NKX1 122 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 AMBPP02760 352 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 ERVFC1-1P60608 527 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 CX3CL1P78423 397 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 CFHR3Q02985 330 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 SPINK9Q5DT21 86 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 FAM90A2PQ658T7 463 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 ZNF343Q6P1L6 599 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 FAM223AQ8IWN6 122 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 C11orf45Q8TAV5 145 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 CCDC140Q96MF4 163 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 C20orf24Q9BUV8 137 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 MRPL27Q9P0M9 148 aaKnown RBP4.88□□□□□ -1.63
CSTF3-201ENST00000323959 CHTOPQ9Y3Y2 248 aaKnown RBP4.88□□□□□ -1.63
CSTF3-201ENST00000323959 TMEM238LA0A1B0GVL6 79 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 C9JCJ5 164 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 FCN1O00602 326 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 GZMBP10144 247 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 FAM167A-AS1Q96KT0 104 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 HIST1H2BLQ99880 126 aa4.88□□□□□ -1.63
CSTF3-201ENST00000323959 RASL11BQ9BPW5 248 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms