RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 SELENOTP62341 195 aa13.22□□□□□ -0.29
SSNA1-201ENST00000322310 KLF12Q9Y4X4 402 aa13.22□□□□□ -0.29
SSNA1-201ENST00000322310 PIGBOS1A0A0B4J2F0 54 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 KRTAP29-1A8MX34 341 aaPredicted RBP13.21□□□□□ -0.29
SSNA1-201ENST00000322310 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 VAMP1P23763 118 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 RRAS2P62070 204 aaPredicted RBP13.21□□□□□ -0.29
SSNA1-201ENST00000322310 TEPPQ6URK8 271 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 S100A7AQ86SG5 101 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 WFDC10BQ8IUB3 73 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 ZNF680Q8NEM1 530 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 FAM30AQ9NZY2 134 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 RABL2BQ9UNT1 228 aa13.21□□□□□ -0.29
SSNA1-201ENST00000322310 CCNKO75909 580 aa13.2□□□□□ -0.3
SSNA1-201ENST00000322310 SLC38A11Q08AI6 406 aa13.2□□□□□ -0.3
SSNA1-201ENST00000322310 LINC00305Q7Z4B0 112 aa13.2□□□□□ -0.3
SSNA1-201ENST00000322310 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
SSNA1-201ENST00000322310 SPINK4O60575 86 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 PRAF2O60831 178 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 HOXB5P09067 269 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 TMEM128Q5BJH2 165 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 DIRAS2Q96HU8 199 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 ST6GAL2Q96JF0 529 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 C8orf49Q96NF6 230 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 ODF3Q96PU9 254 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 PRO0255Q9UI72 69 aa13.19□□□□□ -0.3
SSNA1-201ENST00000322310 CRYBA4P53673 196 aa13.18□□□□□ -0.3
SSNA1-201ENST00000322310 POLR2GP62487 172 aaKnown RBP eCLIP13.18□□□□□ -0.3
SSNA1-201ENST00000322310 MRPL23Q16540 153 aaKnown RBP13.18□□□□□ -0.3
SSNA1-201ENST00000322310 NEGR1Q7Z3B1 354 aa13.18□□□□□ -0.3
SSNA1-201ENST00000322310 BPIFA4PQ86YQ2 179 aa13.18□□□□□ -0.3
SSNA1-201ENST00000322310 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
SSNA1-201ENST00000322310 C7orf71A4D174 169 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 H3BQ15 152 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 EVI2AP22794 236 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 SAT2Q96F10 170 aaPredicted RBP13.17□□□□□ -0.3
SSNA1-201ENST00000322310 PSENENQ9NZ42 101 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 HHLA3Q9XRX5 114 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 DNAH8Q96JB1 4490 aa13.17□□□□□ -0.3
SSNA1-201ENST00000322310 LRCOL1A6NCL2 159 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 K7EPK0 472 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 SLC25A5P05141 298 aaKnown RBP13.16□□□□□ -0.3
SSNA1-201ENST00000322310 IGLC2P0DOY2 106 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 TCL1AP56279 114 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 CD300CQ08708 224 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 BTN1A1Q13410 526 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 FHL2Q14192 279 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 EIF4E3Q8N5X7 224 aaKnown RBP13.16□□□□□ -0.3
SSNA1-201ENST00000322310 NPVFQ9HCQ7 196 aa13.16□□□□□ -0.3
SSNA1-201ENST00000322310 ERCC8Q13216 396 aa13.15□□□□□ -0.3
SSNA1-201ENST00000322310 PPP1R1AQ13522 171 aa13.15□□□□□ -0.3
SSNA1-201ENST00000322310 OPCMLQ14982 345 aa13.15□□□□□ -0.3
SSNA1-201ENST00000322310 ANXA2RQ3ZCQ2 193 aa13.15□□□□□ -0.3
SSNA1-201ENST00000322310 SERTAD4-AS1Q5TG53 156 aa13.15□□□□□ -0.3
SSNA1-201ENST00000322310 NTN5Q8WTR8 489 aaPredicted RBP13.15□□□□□ -0.3
SSNA1-201ENST00000322310 CCDC59Q9P031 241 aaKnown RBP13.15□□□□□ -0.3
SSNA1-201ENST00000322310 TP53TG3Q9ULZ0 132 aa13.15□□□□□ -0.3
SSNA1-201ENST00000322310 E5RGE8 158 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 K7EP13 123 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 GOSR2O14653 212 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 SSSCA1O60232 199 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 PLA2G1BP04054 148 aaKnown RBP13.14□□□□□ -0.31
SSNA1-201ENST00000322310 CRYGDP07320 174 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 METTL15P1P0C7V9 234 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 ID3Q02535 119 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 PXDC1Q5TGL8 231 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 TMEM37Q8WXS4 190 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 VGLL1Q99990 258 aa13.14□□□□□ -0.31
SSNA1-201ENST00000322310 LRP1Q07954 4544 aaKnown RBP13.13□□□□□ -0.31
SSNA1-201ENST00000322310 KLLNB2CW77 178 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 K7EQD1 137 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 PSCAO43653 123 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 COX7A2P2O60397 106 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 SFT2D2O95562 160 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 RNASE4P34096 147 aaKnown RBP13.13□□□□□ -0.31
SSNA1-201ENST00000322310 SLAQ13239 276 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 SPCS2Q15005 226 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 ZNF546Q86UE3 836 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 SYT8Q8NBV8 401 aa13.13□□□□□ -0.31
SSNA1-201ENST00000322310 M0R3E3 92 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 AGPAT2O15120 278 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 SRIP30626 198 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 Q6ZQT7 251 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 LINC00528Q8N1L1 170 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 Q8N814 137 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 DEFB104AQ8WTQ1 72 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 RABL2AQ9UBK7 228 aaPredicted RBP13.12□□□□□ -0.31
SSNA1-201ENST00000322310 MGAT4CQ9UBM8 478 aa13.12□□□□□ -0.31
SSNA1-201ENST00000322310 TRAV5A0A0B4J249 113 aa13.11□□□□□ -0.31
SSNA1-201ENST00000322310 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
SSNA1-201ENST00000322310 C10orf113Q5VZT2 155 aa13.11□□□□□ -0.31
SSNA1-201ENST00000322310 TMEM14EPQ6UXP3 125 aa13.11□□□□□ -0.31
SSNA1-201ENST00000322310 FAM19A4Q96LR4 140 aa13.11□□□□□ -0.31
SSNA1-201ENST00000322310 MRPL32Q9BYC8 188 aaKnown RBP13.11□□□□□ -0.31
SSNA1-201ENST00000322310 RSL24D1Q9UHA3 163 aaKnown RBP13.11□□□□□ -0.31
SSNA1-201ENST00000322310 FNDC10F2Z333 226 aa13.1□□□□□ -0.31
SSNA1-201ENST00000322310 MPDU1O75352 247 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms