RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CSPG4Q6UVK1 2322 aa12.28□□□□□ -0.44
SHROOM1-201ENST00000319854 IGHV3OR16-8A0A075B7F1 116 aa12.28□□□□□ -0.44
SHROOM1-201ENST00000319854 FAM106CPP0CH98 169 aa12.28□□□□□ -0.44
SHROOM1-201ENST00000319854 FAM106AQ4KMX7 169 aa12.28□□□□□ -0.44
SHROOM1-201ENST00000319854 OR5AL1P0C617 328 aa12.28□□□□□ -0.44
SHROOM1-201ENST00000319854 NDFIP1Q9BT67 221 aa12.28□□□□□ -0.44
SHROOM1-201ENST00000319854 IGHV3-35A0A0C4DH35 117 aa12.27□□□□□ -0.44
SHROOM1-201ENST00000319854 A8MWL6 223 aa12.27□□□□□ -0.44
SHROOM1-201ENST00000319854 ATP5IP56385 69 aaPredicted RBP12.27□□□□□ -0.44
SHROOM1-201ENST00000319854 NEGR1Q7Z3B1 354 aa12.27□□□□□ -0.44
SHROOM1-201ENST00000319854 GPR82Q96P67 336 aa12.27□□□□□ -0.44
SHROOM1-201ENST00000319854 TRAV8-1A0A0A6YYK1 113 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 C19orf71A6NCJ1 209 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 TEX22C9J3V5 150 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 UCNP55089 124 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 SEC11AP67812 179 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 C8orf31Q8N9H6 132 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 ZNF747Q9BV97 191 aa12.27□□□□□ -0.45
SHROOM1-201ENST00000319854 IGSF10Q6WRI0 2623 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 K7EP34 96 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 P01737 135 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 KIR3DS1Q14943 382 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 GTF2H5Q6ZYL4 71 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 OVOL3O00110 214 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 CHEK1O14757 476 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 HSPB8Q9UJY1 196 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 H3BRM9 83 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 APOHP02749 345 aaPredicted RBP12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 PRSS57Q6UWY2 283 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 DPM3Q9P2X0 92 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 F11RQ9Y624 299 aaKnown RBP12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 LRRK2Q5S007 2527 aa12.26□□□□□ -0.45
SHROOM1-201ENST00000319854 A0A0G2JLM5 398 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 GNG7O60262 68 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 LOXL1Q08397 574 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 RBPMS2Q6ZRY4 209 aaKnown RBP12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 OR2K2Q8NGT1 345 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 PERPQ96FX8 193 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 AP1S3Q96PC3 154 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 KLF12Q9Y4X4 402 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 EXOC3-AS1Q8N2X6 119 aa12.25□□□□□ -0.45
SHROOM1-201ENST00000319854 FXYD7P58549 80 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 DYNAPQ8N1N2 210 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 RASL11BQ9BPW5 248 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 CRYGBP07316 175 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 ZFP36P26651 326 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 FBXL19-AS1Q494R0 122 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 CIARTQ8N365 385 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 THAP8Q8NA92 274 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 BCL6BQ8N143 479 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 NPFFR1Q9GZQ6 430 aa12.24□□□□□ -0.45
SHROOM1-201ENST00000319854 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.23□□□□□ -0.45
SHROOM1-201ENST00000319854 C17orf77Q96MU5 243 aa12.23□□□□□ -0.45
SHROOM1-201ENST00000319854 A0A096LNJ9 63 aa12.23□□□□□ -0.45
SHROOM1-201ENST00000319854 OR8A1Q8NGG7 326 aa12.23□□□□□ -0.45
SHROOM1-201ENST00000319854 VMO1Q7Z5L0 202 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 WFDC12Q8WWY7 111 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 AP5S1Q9NUS5 200 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 THYN1Q9P016 225 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 INS-IGF2F8WCM5 200 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 NBR2O15453 112 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 LTAP01374 205 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 HIGD1AQ9Y241 93 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 ZNF785A8K8V0 405 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 ARMS2P0C7Q2 107 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 TM4SF20Q53R12 229 aa12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 DAZAP1Q96EP5 407 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-201ENST00000319854 ZNF207O43670 478 aaKnown RBP12.21□□□□□ -0.45
SHROOM1-201ENST00000319854 Q9H3A6 140 aa12.21□□□□□ -0.45
SHROOM1-201ENST00000319854 LY6LH3BQJ8 138 aa12.21□□□□□ -0.46
SHROOM1-201ENST00000319854 CRYGCP07315 174 aa12.21□□□□□ -0.46
SHROOM1-201ENST00000319854 CT83Q5H943 113 aa12.21□□□□□ -0.46
SHROOM1-201ENST00000319854 TRGV9Q99603 122 aa12.21□□□□□ -0.46
SHROOM1-201ENST00000319854 SOX21Q9Y651 276 aaPredicted RBP12.21□□□□□ -0.46
SHROOM1-201ENST00000319854 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.46
SHROOM1-201ENST00000319854 A6NDN8 102 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 IL4P05112 153 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 IFI27P40305 119 aaPredicted RBP12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 SAMD13Q5VXD3 122 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 ADAMTSL5Q6ZMM2 481 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 PCP2Q8IVA1 136 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 BOD1L2Q8IYS8 172 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 A0A1W2PPM0 123 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 HAX1O00165 279 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 IGKV1-17P01599 117 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 COL8A1P27658 744 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 GOLT1AQ6ZVE7 132 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 TPPP3Q9BW30 176 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 SLC25A39Q9BZJ4 359 aaPredicted RBP12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 ZANQ9Y493 2812 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 LOC389332A0A1B0GUA5 103 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 C19orf84I3L1E1 186 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 TCRAP04437 139 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 GNLYP22749 145 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 PLP1P60201 277 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 NDPQ00604 133 aa12.2□□□□□ -0.46
SHROOM1-201ENST00000319854 ZNF492Q9P255 531 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms