RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.57□□□□□ -1.2
RPGR-201ENST00000318842 CHCHD1Q96BP2 118 aaKnown RBP7.57□□□□□ -1.2
RPGR-201ENST00000318842 FMC1Q96HJ9 113 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 ZNF48Q96MX3 618 aaPredicted RBP7.57□□□□□ -1.2
RPGR-201ENST00000318842 PEF1Q9UBV8 284 aaKnown RBP7.57□□□□□ -1.2
RPGR-201ENST00000318842 SPCS1Q9Y6A9 102 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 UTP20O75691 2785 aaKnown RBP7.57□□□□□ -1.2
RPGR-201ENST00000318842 CENPEQ02224 2701 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 M0R296 226 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 FCER1GP30273 86 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 PRR30Q53SZ7 412 aaPredicted RBP7.57□□□□□ -1.2
RPGR-201ENST00000318842 ATP5L2Q7Z4Y8 100 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 RASL11BQ9BPW5 248 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 HSPB8Q9UJY1 196 aa7.57□□□□□ -1.2
RPGR-201ENST00000318842 IGLV3-9A0A075B6K5 115 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 MRPL51Q4U2R6 128 aaKnown RBP7.56□□□□□ -1.2
RPGR-201ENST00000318842 THAP8Q8NA92 274 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 SORL1Q92673 2214 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 TEX22C9J3V5 150 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 TGFAP01135 160 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 MC5RP33032 325 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 SUB1P53999 127 aaKnown RBP eCLIP7.56□□□□□ -1.2
RPGR-201ENST00000318842 PSG3Q16557 428 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 VMA21Q3ZAQ7 101 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 PET117Q6UWS5 81 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 C8orf46Q8TAG6 207 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 C19orf24Q9BVV8 132 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 NHP2Q9NX24 153 aaKnown RBP7.56□□□□□ -1.2
RPGR-201ENST00000318842 PPIAL4EA0A075B759 164 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 SP9P0CG40 484 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 PPIAL4FP0DN26 164 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 EGR2P11161 476 aaPredicted RBP7.56□□□□□ -1.2
RPGR-201ENST00000318842 OR2K2Q8NGT1 345 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 NDFIP1Q9BT67 221 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
RPGR-201ENST00000318842 NDUFB3O43676 98 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 SH2D1AO60880 128 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 CKS2P33552 79 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 HES1Q14469 280 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 FAM71F2Q6NXP2 309 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 RASL11AQ6T310 242 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 SIGLEC15Q6ZMC9 328 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 UBALD2Q8IYN6 164 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 DEFB123Q8N688 67 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 ZNF414Q96IQ9 312 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 PRAC2D3DTV9 90 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 HAX1O00165 279 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 IGHV1-8P0DP01 117 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 RBPJQ06330 500 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 WFDC2Q14508 124 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 NGBQ9NPG2 151 aa7.55□□□□□ -1.2
RPGR-201ENST00000318842 CREBBPQ92793 2442 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 TRBV19A0A075B6N1 114 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 TRAV17A0A0B4J275 112 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 PPIAL4CA0A0B4J2A2 164 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 A1L4Q6 167 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 ORM1P02763 201 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 PPIAL4GP0DN37 164 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 UFSP1Q6NVU6 142 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 PPP1R27Q86WC6 154 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 C1orf162Q8NEQ5 155 aaPredicted RBP7.54□□□□□ -1.2
RPGR-201ENST00000318842 ABHD17AQ96GS6 310 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.54□□□□□ -1.2
RPGR-201ENST00000318842 A0A1B0GV72 72 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 VSTM5A8MXK1 200 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 NDUFS7O75251 213 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 TRGV3P03979 118 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 GRNP28799 593 aaKnown RBP7.54□□□□□ -1.2
RPGR-201ENST00000318842 LGALS7P47929 136 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 MZT1Q08AG7 82 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 ARPC1AQ92747 370 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 TMEM160Q9NX00 188 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 ONECUT1Q9UBC0 465 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 LINC01548A6NM66 108 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 TMEM178BH3BS89 294 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 TIMM23O14925 209 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 SMAD7O15105 426 aaKnown RBP7.54□□□□□ -1.2
RPGR-201ENST00000318842 PRSS1P07477 247 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 CSN1S1P47710 185 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 EFNA4P52798 201 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 ATP5G2Q06055 141 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 ADAMTSL5Q6ZMM2 481 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 MAPKAPK5-AS1Q8N8E1 139 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 DYNLRB1Q9NP97 96 aa7.54□□□□□ -1.2
RPGR-201ENST00000318842 IGHV1-3A0A0C4DH29 117 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 TMEM189A5PLL7 270 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 H3BMG7 143 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 LEPP41159 167 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 PLP1P60201 277 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 C3orf36Q3SXR2 165 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 FAM169BQ8N8A8 192 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 DOPEY2Q9Y3R5 2298 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 NPIPB6E9PJ23 425 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 K7EIM0 57 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 THBDP07204 575 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 EMP1P54849 157 aa7.53□□□□□ -1.2
RPGR-201ENST00000318842 SAMD13Q5VXD3 122 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms