RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 RPL32P62910 135 aaKnown RBP7.16□□□□□ -1.26
COL6A5-202ENST00000312481 TPTE2P1Q5T6R2 138 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 SH2D6Q7Z4S9 175 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 FAM19A2Q8N3H0 131 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 LINC00574Q9H8X3 128 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 D6R8Y8 96 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 CKS1BP61024 79 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 C16orf54Q6UWD8 224 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 HILPDAQ9Y5L2 63 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 TMEM89A2RUT3 159 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 EFNA4P52798 201 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 ST6GALNAC3Q8NDV1 305 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 IGHV1-46P01743 117 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 COX6B1P14854 86 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 TMEM256Q8N2U0 113 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 INSP01308 110 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 PDE6GP18545 87 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 TPRX1Q8N7U7 411 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 TMEM126AQ9H061 195 aa7.16□□□□□ -1.26
COL6A5-202ENST00000312481 Q6ZS92 163 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 TRBV19A0A075B6N1 114 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 TMSB15BA0A087X1C1 80 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 TRAV12-1A0A0B4J245 112 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 NTF4P34130 210 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 TMEM95Q3KNT9 176 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 DEFB125Q8N687 156 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 FAM110DQ8TAY7 271 aaPredicted RBP7.15□□□□□ -1.26
COL6A5-202ENST00000312481 PRADC1Q9BSG0 188 aa7.15□□□□□ -1.26
COL6A5-202ENST00000312481 ZNF688P0C7X2 276 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 DUX5Q96PT3 197 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 THBDP07204 575 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 C15orf32Q32M92 178 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 VMO1Q7Z5L0 202 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 POLR3KQ9Y2Y1 108 aaPredicted RBP7.15□□□□□ -1.27
COL6A5-202ENST00000312481 A0A1W2PPM0 123 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 CFAP161Q6P656 301 aa7.15□□□□□ -1.27
COL6A5-202ENST00000312481 RPL36AP83881 106 aaKnown RBP7.14□□□□□ -1.27
COL6A5-202ENST00000312481 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
COL6A5-202ENST00000312481 UBE2E1P51965 193 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 HERV-K104P63124 156 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 NDUFA4O00483 81 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 FAM219BQ5XKK7 198 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 TRAV41A0A0B4J266 112 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PRR20EP86478 221 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PRR20CP86479 221 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PRR20DP86480 221 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PRR20BP86481 221 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PRR20AP86496 221 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PF4P02776 101 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 CELA2AP08217 269 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 PAX9P55771 341 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 ATP5J2P56134 94 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 TEX48A0A1B0GUV7 120 aa7.14□□□□□ -1.27
COL6A5-202ENST00000312481 TGIF1Q15583 401 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 Q71RC1 249 aaPredicted RBP7.13□□□□□ -1.27
COL6A5-202ENST00000312481 K7EP13 123 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 LCN12Q6JVE5 192 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
COL6A5-202ENST00000312481 H3BMG7 143 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 TMEM200BQ69YZ2 307 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 PSPNO60542 156 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 C9orf106Q8NAJ2 232 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 TIMM21Q9BVV7 248 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 DEPPQ9NTK1 212 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 CD59P13987 128 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 RPL15P61313 204 aaKnown RBP7.13□□□□□ -1.27
COL6A5-202ENST00000312481 SMIM2Q9BVW6 85 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 H3BRN7 92 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 DUX3Q96PT4 197 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 SNHG12Q9BXW3 62 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 PRO1854Q9UHT4 67 aa7.13□□□□□ -1.27
COL6A5-202ENST00000312481 USP9XQ93008 2570 aaPredicted RBP7.13□□□□□ -1.27
COL6A5-202ENST00000312481 PMS2P5A8MQ11 134 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 I3L3M4 83 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 TDGF1P13385 188 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 PLAUP00749 431 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 MRPL23Q16540 153 aaKnown RBP7.12□□□□□ -1.27
COL6A5-202ENST00000312481 C11orf44Q8N8P7 122 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 GAFA1Q96PS6 74 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 C15orf65H3BRN8 121 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 EFNA2O43921 213 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 CD7P09564 240 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 LINC00473A8K010 186 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 UBE2WQ96B02 151 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 HTN1P15515 57 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 GFI1BQ5VTD9 330 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 PIFOQ8TCI5 191 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 FAM216BQ8N7L0 139 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 SPRR3Q9UBC9 169 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 CCL25O15444 150 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 LHBP01229 141 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
COL6A5-202ENST00000312481 IGKV1D-17A0A075B6S4 117 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 IGHV3-7P01780 117 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 CD28P10747 220 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 VGLL1Q99990 258 aa7.12□□□□□ -1.27
COL6A5-202ENST00000312481 B4DSR2 109 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 HERVK_113P63121 156 aa7.11□□□□□ -1.27
COL6A5-202ENST00000312481 ZNHIT1O43257 154 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms