RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 A0A0J9YWU9 116 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 ARPC5O15511 151 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 TCTE3Q8IZS6 198 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 IGF2BP2-AS1Q96M15 143 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 XCL2Q9UBD3 114 aa12.9□□□□□ -0.34
CCS-201ENST00000310190 A0A0D9SG52 128 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 NPIPB6E9PJ23 425 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 CRXO43186 299 aaPredicted RBP12.89□□□□□ -0.35
CCS-201ENST00000310190 RAB2AP61019 212 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 OR10G9Q8NGN4 311 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 OR10G7Q8NGN6 311 aa12.89□□□□□ -0.35
CCS-201ENST00000310190 KMT2CQ8NEZ4 4911 aaKnown RBP12.89□□□□□ -0.35
CCS-201ENST00000310190 A0A1W2PPV4 95 aa12.88□□□□□ -0.35
CCS-201ENST00000310190 BOLA2-SMG1P6H3BVE0 249 aa12.88□□□□□ -0.35
CCS-201ENST00000310190 STAG3L2P0CL84 134 aa12.88□□□□□ -0.35
CCS-201ENST00000310190 STAG3L3P0CL85 134 aa12.88□□□□□ -0.35
CCS-201ENST00000310190 AAMDCQ9H7C9 122 aa12.88□□□□□ -0.35
CCS-201ENST00000310190 PRAC2D3DTV9 90 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 SMLR1H3BR10 107 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 H3BTX0 84 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 OR7C2O60412 319 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 HIST1H1AQ02539 215 aaPredicted RBP12.87□□□□□ -0.35
CCS-201ENST00000310190 C1orf158Q8N1D5 194 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 OR10J6PQ8NGY7 276 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 C20orf144Q9BQM9 153 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 PPP1R14DQ9NXH3 145 aa12.87□□□□□ -0.35
CCS-201ENST00000310190 TRBV7-9A0A0J9YWB2 115 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 SLC25A5P05141 298 aaKnown RBP12.86□□□□□ -0.35
CCS-201ENST00000310190 NMBP08949 121 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 SNRPCP09234 159 aaKnown RBP12.86□□□□□ -0.35
CCS-201ENST00000310190 RBMY1A1P0DJD3 496 aaKnown RBP12.86□□□□□ -0.35
CCS-201ENST00000310190 RBMY1CP0DJD4 496 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 CDC34P49427 236 aaPredicted RBP12.86□□□□□ -0.35
CCS-201ENST00000310190 RBMY1FQ15415 496 aaKnown RBP12.86□□□□□ -0.35
CCS-201ENST00000310190 C9orf47Q6ZRZ4 202 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 FAM19A4Q96LR4 140 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 LINC00477Q96M19 166 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 ARPC5LQ9BPX5 153 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 SH3BGRL3Q9H299 93 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 GOLT1BQ9Y3E0 138 aa12.86□□□□□ -0.35
CCS-201ENST00000310190 IGHV4-28A0A0C4DH34 117 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 TMEM189A5PLL7 270 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 RBAKDNA6NC62 111 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 M0R3E3 92 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 OR10J4P0C629 311 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 TSPOP30536 169 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 CDKN1BP46527 198 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 UBE2L3P68036 154 aaKnown RBP12.85□□□□□ -0.35
CCS-201ENST00000310190 BLNKQ8WV28 456 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
CCS-201ENST00000310190 LYSTQ99698 3801 aa12.84□□□□□ -0.35
CCS-201ENST00000310190 ICAM4Q14773 271 aa12.84□□□□□ -0.35
CCS-201ENST00000310190 FAM122CQ6P4D5 195 aa12.84□□□□□ -0.35
CCS-201ENST00000310190 EXOC3-AS1Q8N2X6 119 aa12.84□□□□□ -0.35
CCS-201ENST00000310190 ACTR3CQ9C0K3 210 aaPredicted RBP12.84□□□□□ -0.35
CCS-201ENST00000310190 PLECQ15149 4684 aaKnown RBP12.84□□□□□ -0.35
CCS-201ENST00000310190 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 M0R2Z0 102 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 BCL2L11O43521 198 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 INSP01308 110 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 SEC11BP0C7V7 166 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 CT45A10P0DMU9 189 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 CRISP2P16562 243 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 SPINK13Q1W4C9 94 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 RXFP4Q8TDU9 374 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
CCS-201ENST00000310190 CTXND1A0A1B0GTU2 59 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 C1QBP02746 253 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 FXYD7P58549 80 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 AGPAT4-IT1Q9H0P7 198 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 Q9H3A6 140 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 LENEPQ9Y5L5 61 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 RYR3Q15413 4870 aa12.82□□□□□ -0.36
CCS-201ENST00000310190 CXorf1O96002 111 aa12.81□□□□□ -0.36
CCS-201ENST00000310190 ARL14EPLP0DKL9 152 aa12.81□□□□□ -0.36
CCS-201ENST00000310190 LEPP41159 167 aa12.81□□□□□ -0.36
CCS-201ENST00000310190 RANP62826 216 aaKnown RBP12.81□□□□□ -0.36
CCS-201ENST00000310190 EIF5AP63241 154 aaKnown RBP12.81□□□□□ -0.36
CCS-201ENST00000310190 STOML3Q8TAV4 291 aa12.81□□□□□ -0.36
CCS-201ENST00000310190 TMEM167BQ9NRX6 74 aa12.81□□□□□ -0.36
CCS-201ENST00000310190 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 KANTRA0A1W2PQU2 76 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 KLLNB2CW77 178 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 UMAD1C9J7I0 102 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 GCHFRP30047 84 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 ZNF726P1Q15940 193 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 HYLS1Q96M11 299 aa12.8□□□□□ -0.36
CCS-201ENST00000310190 TEX48A0A1B0GUV7 120 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 HBE1P02100 147 aa12.79□□□□□ -0.36
CCS-201ENST00000310190 CSN1S1P47710 185 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms