RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 GCSAMLQ5JQS6 135 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 Q6ZRG5 221 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 NIPSNAP3BQ9BS92 247 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 MED28Q9H204 178 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 ALG5Q9Y673 324 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 FGF7P21781 194 aa14.05□□□□□ -0.16
PDZRN3-202ENST00000308537 TSPOP30536 169 aa14.05□□□□□ -0.16
PDZRN3-202ENST00000308537 OR1L4Q8NGR5 311 aa14.05□□□□□ -0.16
PDZRN3-202ENST00000308537 LRRC20Q8TCA0 184 aa14.05□□□□□ -0.16
PDZRN3-202ENST00000308537 NPCDR1Q9BY65 106 aa14.05□□□□□ -0.16
PDZRN3-202ENST00000308537 TEX48A0A1B0GUV7 120 aa14.04□□□□□ -0.16
PDZRN3-202ENST00000308537 MPDU1O75352 247 aa14.04□□□□□ -0.16
PDZRN3-202ENST00000308537 OR5C1Q8NGR4 320 aa14.04□□□□□ -0.16
PDZRN3-202ENST00000308537 PFDN5Q99471 154 aa14.04□□□□□ -0.16
PDZRN3-202ENST00000308537 PARD6GQ9BYG4 376 aaPredicted RBP14.04□□□□□ -0.16
PDZRN3-202ENST00000308537 NACAE9PAV3 2078 aa14.03□□□□□ -0.16
PDZRN3-202ENST00000308537 NDUFB4O95168 129 aa14.03□□□□□ -0.16
PDZRN3-202ENST00000308537 MPC2O95563 127 aa14.03□□□□□ -0.16
PDZRN3-202ENST00000308537 FAM167A-AS1Q96KT0 104 aa14.03□□□□□ -0.16
PDZRN3-202ENST00000308537 ZNF253O75346 499 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 CDKN1BP46527 198 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 RHOBP62745 196 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 THAP6Q8TBB0 222 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 TMEM208Q9BTX3 173 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 NDUFAF3Q9BU61 184 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 TMEM14CQ9P0S9 112 aa14.02□□□□□ -0.17
PDZRN3-202ENST00000308537 TRBV19A0A075B6N1 114 aa14.01□□□□□ -0.17
PDZRN3-202ENST00000308537 GUK1Q16774 197 aa14.01□□□□□ -0.17
PDZRN3-202ENST00000308537 ASB13Q8WXK3 278 aa14.01□□□□□ -0.17
PDZRN3-202ENST00000308537 KCNIP2Q9NS61 270 aa14.01□□□□□ -0.17
PDZRN3-202ENST00000308537 NPIPB6E9PJ23 425 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 M0R3E3 92 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 CT45A10P0DMU9 189 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 PYYP10082 97 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 GFI1BQ5VTD9 330 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 TMEM256Q8N2U0 113 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 FAM210BQ96KR6 192 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 SLC25A2Q9BXI2 301 aa14□□□□□ -0.17
PDZRN3-202ENST00000308537 WDR61Q9GZS3 305 aaKnown RBP14□□□□□ -0.17
PDZRN3-202ENST00000308537 LYRM9A8MSI8 78 aa13.99□□□□□ -0.17
PDZRN3-202ENST00000308537 TAS2R60P59551 318 aa13.99□□□□□ -0.17
PDZRN3-202ENST00000308537 CLINT1Q14677 625 aa13.99□□□□□ -0.17
PDZRN3-202ENST00000308537 RNASE8Q8TDE3 154 aaKnown RBP13.99□□□□□ -0.17
PDZRN3-202ENST00000308537 HIST1H1EP10412 219 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 DAD1P61803 113 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 FCN2Q15485 313 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 MIR17HGQ75NE6 70 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 POM121L12Q8N7R1 296 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 MRPL53Q96EL3 112 aaKnown RBP13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 ODF3Q96PU9 254 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 LINC01587Q99440 93 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 MBD2Q9UBB5 411 aa13.98□□□□□ -0.17
PDZRN3-202ENST00000308537 C17orf112F2Z3M2 114 aa13.97□□□□□ -0.17
PDZRN3-202ENST00000308537 RPL12P30050 165 aaKnown RBP13.97□□□□□ -0.17
PDZRN3-202ENST00000308537 PDE6HQ13956 83 aa13.97□□□□□ -0.17
PDZRN3-202ENST00000308537 FAM19A4Q96LR4 140 aa13.97□□□□□ -0.17
PDZRN3-202ENST00000308537 C20orf144Q9BQM9 153 aa13.97□□□□□ -0.17
PDZRN3-202ENST00000308537 HSPB11Q9Y547 144 aa13.97□□□□□ -0.17
PDZRN3-202ENST00000308537 PKHD1P08F94 4074 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 IFNA5P01569 189 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 P0DMU3 169 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 FAM231AP0DMU4 169 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 FAM231CP0DMU5 169 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 OR10J6PQ8NGY7 276 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 SCGB1C1Q8TD33 95 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 ZNF503Q96F45 646 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 ATP5SQ99766 215 aa13.96□□□□□ -0.17
PDZRN3-202ENST00000308537 H7BYZ3 331 aa13.95□□□□□ -0.18
PDZRN3-202ENST00000308537 GIPP09681 153 aaPredicted RBP13.95□□□□□ -0.18
PDZRN3-202ENST00000308537 HTN3P15516 51 aa13.95□□□□□ -0.18
PDZRN3-202ENST00000308537 LINC00612Q8N6U2 182 aa13.95□□□□□ -0.18
PDZRN3-202ENST00000308537 TMEM263Q8WUH6 116 aaKnown RBP13.95□□□□□ -0.18
PDZRN3-202ENST00000308537 PPP1R14DQ9NXH3 145 aa13.95□□□□□ -0.18
PDZRN3-202ENST00000308537 PKD1P98161 4303 aa13.94□□□□□ -0.18
PDZRN3-202ENST00000308537 EXOC3-AS1Q8N2X6 119 aa13.94□□□□□ -0.18
PDZRN3-202ENST00000308537 FXYD5Q96DB9 178 aa13.94□□□□□ -0.18
PDZRN3-202ENST00000308537 C16orf74Q96GX8 76 aa13.94□□□□□ -0.18
PDZRN3-202ENST00000308537 DNAH11Q96DT5 4516 aa13.93□□□□□ -0.18
PDZRN3-202ENST00000308537 ERCC8Q13216 396 aa13.93□□□□□ -0.18
PDZRN3-202ENST00000308537 ZNF493Q6ZR52 646 aa13.93□□□□□ -0.18
PDZRN3-202ENST00000308537 AGPAT4-IT1Q9H0P7 198 aa13.93□□□□□ -0.18
PDZRN3-202ENST00000308537 WFDC1Q9HC57 220 aa13.93□□□□□ -0.18
PDZRN3-202ENST00000308537 KLLNB2CW77 178 aa13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 DEFB130BP0DP73 79 aa13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 DEFB130AP0DP74 79 aa13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 BLNKQ8WV28 456 aa13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 MRPL32Q9BYC8 188 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 FUT9Q9Y231 359 aa13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 DYNC1H1Q14204 4646 aaKnown RBP13.92□□□□□ -0.18
PDZRN3-202ENST00000308537 HTN1P15515 57 aa13.91□□□□□ -0.18
PDZRN3-202ENST00000308537 C9orf47Q6ZRZ4 202 aa13.91□□□□□ -0.18
PDZRN3-202ENST00000308537 OR51M1Q9H341 326 aa13.91□□□□□ -0.18
PDZRN3-202ENST00000308537 NOP10Q9NPE3 64 aaKnown RBP13.91□□□□□ -0.18
PDZRN3-202ENST00000308537 PRELID1Q9Y255 219 aa13.91□□□□□ -0.18
PDZRN3-202ENST00000308537 TIMM8BQ9Y5J9 83 aaPredicted RBP13.91□□□□□ -0.18
PDZRN3-202ENST00000308537 TRAV12-3A0A0B4J271 114 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 J3KRW8 73 aa13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 ZNF324O75467 553 aaPredicted RBP13.9□□□□□ -0.18
PDZRN3-202ENST00000308537 NBEAP1P0C6P0 100 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms