RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 NDUFA3O95167 84 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 ADORA2A-AS1P86434 159 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 Q6AWC8 147 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 NPBQ8NG41 125 aa11.85□□□□□ -0.51
CSDC2-201ENST00000306149 NDUFS7O75251 213 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 CEACAM3P40198 252 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 MS4A6AQ9H2W1 248 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 IGLV11-55A0A075B6I3 123 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
CSDC2-201ENST00000306149 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
CSDC2-201ENST00000306149 TMEM11P17152 192 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 MPV17L2Q567V2 206 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 LINC01545Q5VT33 79 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 NEU4Q8WWR8 484 aaPredicted RBP11.84□□□□□ -0.51
CSDC2-201ENST00000306149 ARPC1AQ92747 370 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 PRTN3P24158 256 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 MFAP4P55083 255 aa11.84□□□□□ -0.51
CSDC2-201ENST00000306149 SERTM2A0A1B0GWG4 89 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 VMO1Q7Z5L0 202 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 TMEM213A2RRL7 107 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 ODF3BA8MYP8 253 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 ZFP36P26651 326 aaKnown RBP11.83□□□□□ -0.52
CSDC2-201ENST00000306149 HLA-DMBP28068 263 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 FBXL19-AS1Q494R0 122 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 FAM106AQ4KMX7 169 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 AP5S1Q9NUS5 200 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 C21orf62Q9NYP8 219 aa11.83□□□□□ -0.52
CSDC2-201ENST00000306149 K7EP13 123 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 BVES-AS1Q5T3Y7 98 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 ZNF562Q6V9R5 426 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 Q8TAT8 98 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 AAMDCQ9H7C9 122 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 RAXQ9Y2V3 346 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 VPS13CQ709C8 3753 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 LOC389332A0A1B0GUA5 103 aa11.82□□□□□ -0.52
CSDC2-201ENST00000306149 CT45A10P0DMU9 189 aa11.81□□□□□ -0.52
CSDC2-201ENST00000306149 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
CSDC2-201ENST00000306149 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
CSDC2-201ENST00000306149 ZNF493Q6ZR52 646 aa11.81□□□□□ -0.52
CSDC2-201ENST00000306149 FXYD7P58549 80 aa11.81□□□□□ -0.52
CSDC2-201ENST00000306149 M0R1W7 72 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 NUDT3O95989 172 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 PDE6HQ13956 83 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 ZNF747Q9BV97 191 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 TRAV30A0A087WSZ9 112 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 A0A1W2PPR1 153 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 NPIPB5A8MRT5 1133 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 TAX1BP3O14907 124 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 SH2D1AO60880 128 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 LOXL1Q08397 574 aaPredicted RBP11.8□□□□□ -0.52
CSDC2-201ENST00000306149 FA2HQ7L5A8 372 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 ERASQ7Z444 233 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 DEFB125Q8N687 156 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 OR10AG1Q8NH19 301 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 PRSS3P2Q8NHM4 247 aa11.8□□□□□ -0.52
CSDC2-201ENST00000306149 CTSGP08311 255 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 IFI27P40305 119 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-201ENST00000306149 CSN1S1P47710 185 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 HIST1H1AQ02539 215 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-201ENST00000306149 C11orf71Q6IPW1 123 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 S100A7AQ86SG5 101 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 TMEM189A5PLL7 270 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 EGR2P11161 476 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-201ENST00000306149 RHOGP84095 191 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 AMN1Q8IY45 258 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 TTC9CQ8N5M4 171 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 VGLL1Q99990 258 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 D6R8Y8 96 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 ZNF48Q96MX3 618 aaPredicted RBP11.79□□□□□ -0.52
CSDC2-201ENST00000306149 SMAD5-AS1Q9Y6J3 95 aa11.79□□□□□ -0.52
CSDC2-201ENST00000306149 NCR2O95944 276 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 ZNF80P51504 273 aaPredicted RBP11.78□□□□□ -0.52
CSDC2-201ENST00000306149 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 U3KQK5 164 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 IGHV3OR16-13A0A075B7E8 117 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 IGHV3-74A0A0B4J1X5 117 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 COX8AP10176 69 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 VAMP3Q15836 100 aa11.78□□□□□ -0.52
CSDC2-201ENST00000306149 SMKR1H3BMG3 65 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 ECSCRQ19T08 205 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 A6NJY4 79 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 SNAI2O43623 268 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 TCTAP57738 103 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 RPS20P60866 119 aaKnown RBP11.77□□□□□ -0.53
CSDC2-201ENST00000306149 COX8CQ7Z4L0 72 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 DPF1Q92782 380 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 MSRB2Q9Y3D2 182 aa11.77□□□□□ -0.53
CSDC2-201ENST00000306149 A0A096LNJ9 63 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 IGHG4P01861 327 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 S100A7P31151 101 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 GPR183P32249 361 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 Q8N6K4 173 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 PRR25Q96S07 402 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 THYN1Q9P016 225 aa11.76□□□□□ -0.53
CSDC2-201ENST00000306149 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms