RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 CST9LP1Q5W188 147 aa11.96□□□□□ -0.49
SRGAP2C-201ENST00000304465 FAM90A2PQ658T7 463 aa11.96□□□□□ -0.49
SRGAP2C-201ENST00000304465 GLMPQ8WWB7 406 aa11.96□□□□□ -0.49
SRGAP2C-201ENST00000304465 SPAG8Q99932 426 aaPredicted RBP11.96□□□□□ -0.49
SRGAP2C-201ENST00000304465 IGHV7-4-1A0A0J9YVY3 117 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 RPL7P18124 248 aaKnown RBP11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 BLNKQ8WV28 456 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 NARS2Q96I59 477 aaKnown RBP11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 TXNDC17Q9BRA2 123 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 SMPXQ9UHP9 88 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 STAB2Q8WWQ8 2551 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 TMEM250H0YL14 139 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 SLC17A3O00476 420 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 TSPAN4O14817 238 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 S100A7P31151 101 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 LINC00322Q6ZN03 302 aaPredicted RBP11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 SEC11CQ9BY50 192 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 RNF24Q9Y225 148 aa11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 CARHSP1Q9Y2V2 147 aaKnown RBP11.95□□□□□ -0.5
SRGAP2C-201ENST00000304465 A0A087X0K7 114 aa11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 RBMY1BA6NDE4 496 aaKnown RBP11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 RBMY1EA6NEQ0 496 aaKnown RBP11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 CHEK1O14757 476 aa11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 RBMY1DP0C7P1 496 aaKnown RBP11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 BMI1P35226 326 aa11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 RANP62826 216 aaKnown RBP11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 SUMO1P63165 101 aaKnown RBP11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 SIGLEC15Q6ZMC9 328 aa11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 C11orf52Q96A22 123 aa11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 GPR82Q96P67 336 aa11.94□□□□□ -0.5
SRGAP2C-201ENST00000304465 OR4C46A6NHA9 309 aa11.93□□□□□ -0.5
SRGAP2C-201ENST00000304465 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.93□□□□□ -0.5
SRGAP2C-201ENST00000304465 RHPN1-AS1Q9BWJ2 59 aa11.93□□□□□ -0.5
SRGAP2C-201ENST00000304465 LOC102724200A0A096LPH7 203 aaPredicted RBP11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 SCO2A0A1W2PP80 73 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 F8W036 122 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 PDE6DO43924 150 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 PDE6HQ13956 83 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 CASC10Q5T4H9 136 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 Q9H3A6 140 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 RETNQ9HD89 108 aa11.92□□□□□ -0.5
SRGAP2C-201ENST00000304465 F6UZH7 168 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 ZNF253O75346 499 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 SOHLH1Q5JUK2 328 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 EXOC3-AS1Q8N2X6 119 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 FAM110AQ9BQ89 295 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
SRGAP2C-201ENST00000304465 A0A1W2PS18 150 aa11.9□□□□□ -0.5
SRGAP2C-201ENST00000304465 PGPA6NDG6 321 aa11.9□□□□□ -0.5
SRGAP2C-201ENST00000304465 GALR1P47211 349 aa11.9□□□□□ -0.5
SRGAP2C-201ENST00000304465 LYPD1Q8N2G4 141 aa11.9□□□□□ -0.5
SRGAP2C-201ENST00000304465 C2CD4CQ8TF44 421 aa11.9□□□□□ -0.5
SRGAP2C-201ENST00000304465 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
SRGAP2C-201ENST00000304465 ATF4P18848 351 aaPredicted RBP11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 PARLQ9H300 379 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 TRBV20OR9-2A0A075B6H5 130 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 TRAV8-2A0A0B4J237 113 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 CEBPGP53567 150 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 APOC4P55056 127 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 CMC4P56277 68 aaPredicted RBP11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 GNG5P63218 68 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 RPUSD4Q96CM3 377 aaKnown RBP11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 EPDR1Q9UM22 224 aa11.89□□□□□ -0.51
SRGAP2C-201ENST00000304465 SOCS3O14543 225 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 APOC3P02656 99 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 HLA-DMBP28068 263 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 TFPI2P48307 235 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 C5orf17Q8NAS9 161 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 IL17DQ8TAD2 202 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 TCEAL7Q9BRU2 100 aa11.88□□□□□ -0.51
SRGAP2C-201ENST00000304465 M0R3E3 92 aa11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 PEX7O00628 323 aa11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 SLC25A5P05141 298 aaKnown RBP11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 ATRAIDQ6UW56 229 aa11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
SRGAP2C-201ENST00000304465 DNASE2O00115 360 aaPredicted RBP11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 MEOX2P50222 304 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 PSG9Q00887 426 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 ODF3L2Q3SX64 289 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 TCF24Q7RTU0 167 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 HIST1H2BAQ96A08 127 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 KLF12Q9Y4X4 402 aa11.86□□□□□ -0.51
SRGAP2C-201ENST00000304465 HELTA6NFD8 242 aa11.85□□□□□ -0.51
SRGAP2C-201ENST00000304465 ZNF727A8MUV8 499 aa11.85□□□□□ -0.51
SRGAP2C-201ENST00000304465 TCRAP04437 139 aa11.85□□□□□ -0.51
SRGAP2C-201ENST00000304465 RPL35P42766 123 aaKnown RBP11.85□□□□□ -0.51
SRGAP2C-201ENST00000304465 ZNF674Q2M3X9 581 aa11.85□□□□□ -0.51
SRGAP2C-201ENST00000304465 FAM74A3Q4VXF1 159 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms