RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 SULT1A2P50226 295 aa13.06□□□□□ -0.32
TMEM88-201ENST00000301599 IGFL4Q6B9Z1 124 aa13.06□□□□□ -0.32
TMEM88-201ENST00000301599 IGF2BP2-AS1Q96M15 143 aa13.06□□□□□ -0.32
TMEM88-201ENST00000301599 RCL1Q9Y2P8 373 aaKnown RBP13.06□□□□□ -0.32
TMEM88-201ENST00000301599 CNN1P51911 297 aaKnown RBP13.05□□□□□ -0.32
TMEM88-201ENST00000301599 RRN3P1Q2M238 152 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 AMTNQ6UX39 209 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 PATE2Q6UY27 113 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 PCNPQ8WW12 178 aaKnown RBP13.05□□□□□ -0.32
TMEM88-201ENST00000301599 UHRF2Q96PU4 802 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 TMEM208Q9BTX3 173 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 NDUFAF3Q9BU61 184 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 DKK2Q9UBU2 259 aa13.05□□□□□ -0.32
TMEM88-201ENST00000301599 ARL16Q0P5N6 197 aa13.04□□□□□ -0.32
TMEM88-201ENST00000301599 RNF182Q8N6D2 247 aa13.04□□□□□ -0.32
TMEM88-201ENST00000301599 ZNF738Q8NE65 137 aa13.04□□□□□ -0.32
TMEM88-201ENST00000301599 TMED6Q8WW62 240 aa13.04□□□□□ -0.32
TMEM88-201ENST00000301599 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
TMEM88-201ENST00000301599 A0A087X0K7 114 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 LOC102723971A0A1B0GUV8 181 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 AGPAT2O15120 278 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 B2MP61769 119 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 SLC38A11Q08AI6 406 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 FAM74A1Q5RGS3 127 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
TMEM88-201ENST00000301599 P0DMU3 169 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 FAM231AP0DMU4 169 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 FAM231CP0DMU5 169 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 PSG3Q16557 428 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 RPL7L1Q6DKI1 246 aaKnown RBP13.02□□□□□ -0.33
TMEM88-201ENST00000301599 SVBPQ8N300 66 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 GNPNAT1Q96EK6 184 aaPredicted RBP13.02□□□□□ -0.33
TMEM88-201ENST00000301599 FAM210BQ96KR6 192 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 YTHDF2Q9Y5A9 579 aaKnown RBP13.02□□□□□ -0.33
TMEM88-201ENST00000301599 VPS13DQ5THJ4 4388 aa13.02□□□□□ -0.33
TMEM88-201ENST00000301599 RAB31Q13636 194 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 SPINK13Q1W4C9 94 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 LINC00305Q7Z4B0 112 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 STX12Q86Y82 276 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 SMDT1Q9H4I9 107 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 LYRM2Q9NU23 88 aaPredicted RBP13.01□□□□□ -0.33
TMEM88-201ENST00000301599 PPP1R14DQ9NXH3 145 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 PLA2G2EQ9NZK7 142 aa13.01□□□□□ -0.33
TMEM88-201ENST00000301599 TMEM218A2RU14 115 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 M0R2Z0 102 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 INSP01308 110 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 CAV2P51636 162 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 RHOBP62745 196 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 POM121L12Q8N7R1 296 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
TMEM88-201ENST00000301599 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
TMEM88-201ENST00000301599 CRXO43186 299 aaPredicted RBP12.99□□□□□ -0.33
TMEM88-201ENST00000301599 COX7A2P2O60397 106 aa12.99□□□□□ -0.33
TMEM88-201ENST00000301599 RAB2AP61019 212 aa12.99□□□□□ -0.33
TMEM88-201ENST00000301599 HIST1H1AQ02539 215 aaPredicted RBP12.99□□□□□ -0.33
TMEM88-201ENST00000301599 DPPA3Q6W0C5 159 aa12.99□□□□□ -0.33
TMEM88-201ENST00000301599 Q6ZRG5 221 aa12.99□□□□□ -0.33
TMEM88-201ENST00000301599 BPIFA4PQ86YQ2 179 aa12.99□□□□□ -0.33
TMEM88-201ENST00000301599 MGST2Q99735 147 aa12.99□□□□□ -0.33
TMEM88-201ENST00000301599 FAM24AA6NFZ4 105 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 CST7O76096 145 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 APOC3P02656 99 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 CAMLGP49069 296 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 DAD1P61803 113 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 C10orf113Q5VZT2 155 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 LCN15Q6UWW0 184 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 LYPD6BQ8NI32 183 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 TMEM37Q8WXS4 190 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
TMEM88-201ENST00000301599 SEC11CQ9BY50 192 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 C11orf1Q9H5F2 150 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 DNAJC4Q9NNZ3 241 aa12.98□□□□□ -0.33
TMEM88-201ENST00000301599 ZNF705GA8MUZ8 300 aaPredicted RBP12.97□□□□□ -0.33
TMEM88-201ENST00000301599 SNAPINO95295 136 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 HBG1P69891 147 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 HBG2P69892 147 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 PEA15Q15121 130 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 ZNF331Q9NQX6 463 aaPredicted RBP12.97□□□□□ -0.33
TMEM88-201ENST00000301599 UQCC1Q9NVA1 299 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 CARHSP1Q9Y2V2 147 aaKnown RBP12.97□□□□□ -0.33
TMEM88-201ENST00000301599 DNAH10Q8IVF4 4471 aa12.97□□□□□ -0.33
TMEM88-201ENST00000301599 IFNA5P01569 189 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 HTN3P15516 51 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 TSPOP30536 169 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 C10orf91Q5T1B1 145 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 TMEM252Q8N6L7 170 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 LINC01587Q99440 93 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 TREM1Q9NP99 234 aa12.96□□□□□ -0.33
TMEM88-201ENST00000301599 TRAV12-2A0A075B6T6 113 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 LYRM9A8MSI8 78 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 PRM2P04554 102 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 SULT1A1P50225 295 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 TMEM256Q8N2U0 113 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 OR1L4Q8NGR5 311 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 WDR83OSQ9Y284 106 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 FRAS1Q86XX4 4008 aa12.95□□□□□ -0.34
TMEM88-201ENST00000301599 F8W036 122 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms