RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 GAGE12HA6NDE8 117 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 GPR179Q6PRD1 2367 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 INS-IGF2F8WCM5 200 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 GFI1Q99684 422 aa9.23□□□□□ -0.93
GCN1-201ENST00000300648 IGHV1-3A0A0C4DH29 117 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 NCR2O95944 276 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 C18orf32Q8TCD1 76 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
GCN1-201ENST00000300648 IGHV3-64A0A075B6Q5 118 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 CSPG4Q6UVK1 2322 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 KLHDC3Q9BQ90 382 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 FAM104BQ5XKR9 115 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 SMIM20Q8N5G0 67 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 TMEM14CQ9P0S9 112 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 POLR3KQ9Y2Y1 108 aaPredicted RBP9.22□□□□□ -0.93
GCN1-201ENST00000300648 SCRT1Q9BWW7 348 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
GCN1-201ENST00000300648 IGKV1-5P01602 117 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 S4R3C0 116 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 MYO9AB2RTY4 2548 aa9.22□□□□□ -0.93
GCN1-201ENST00000300648 TRGV1A0A0A0MS02 117 aa9.21□□□□□ -0.93
GCN1-201ENST00000300648 GAS1P54826 345 aa9.21□□□□□ -0.93
GCN1-201ENST00000300648 YPEL3P61236 119 aaPredicted RBP9.21□□□□□ -0.93
GCN1-201ENST00000300648 LYPD3O95274 346 aa9.21□□□□□ -0.93
GCN1-201ENST00000300648 CCL3L1P16619 93 aa9.21□□□□□ -0.93
GCN1-201ENST00000300648 ZFP36L1Q07352 338 aaKnown RBP9.21□□□□□ -0.93
GCN1-201ENST00000300648 NABP1Q96AH0 204 aa9.21□□□□□ -0.93
GCN1-201ENST00000300648 SUMO4Q6EEV6 95 aa9.21□□□□□ -0.93
GCN1-201ENST00000300648 SMIM27A0A1W2PRY6 76 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 CELA3BP08861 270 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 AZU1P20160 251 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 VMO1Q7Z5L0 202 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 NAV3Q8IVL0 2385 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 TANC2Q9HCD6 1990 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 IGHV3-11P01762 117 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 GLMPQ8WWB7 406 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 BVES-AS1Q5T3Y7 98 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 C1orf159Q96HA4 380 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 COL4A5P29400 1685 aa9.21□□□□□ -0.94
GCN1-201ENST00000300648 IGLC2P0DOY2 106 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 IGLC3P0DOY3 106 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 HLA-DRB4P13762 266 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 STPG4Q8N801 248 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 HLA-DRB4X5D2U9 266 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 F8VRH5 84 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 FOXF2Q12947 444 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 CEND1Q8N111 149 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 TMEM14BQ9NUH8 114 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 FAM27E3Q08E93 113 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 QRFPP83859 136 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 LINC01560Q8TB33 94 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 TRBV25-1A0A075B6N4 114 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 TIAF1O95411 115 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 CEACAM8P31997 349 aaPredicted RBP9.2□□□□□ -0.94
GCN1-201ENST00000300648 Q6ZVH6 145 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 ANKRD29Q8N6D5 301 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 RMI2Q96E14 147 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 HTN3P15516 51 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 HERVK_113P63121 156 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 TCTEX1D4Q5JR98 221 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 C14orf178Q8N769 122 aaPredicted RBP9.2□□□□□ -0.94
GCN1-201ENST00000300648 SPANXB1Q9NS25 103 aaPredicted RBP9.2□□□□□ -0.94
GCN1-201ENST00000300648 METRNQ9UJH8 293 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 SIGLEC9Q9Y336 463 aa9.2□□□□□ -0.94
GCN1-201ENST00000300648 C15orf62A8K5M9 175 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 RBM3P98179 157 aaKnown RBP9.19□□□□□ -0.94
GCN1-201ENST00000300648 BUB1B-PAK6H3BSN5 160 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 NPC2P61916 151 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 RPL15P61313 204 aaKnown RBP9.19□□□□□ -0.94
GCN1-201ENST00000300648 IGHG3P01860 377 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 WIPF2Q8TF74 440 aaPredicted RBP9.19□□□□□ -0.94
GCN1-201ENST00000300648 RNF114Q9Y508 228 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 IGHV1-18A0A0C4DH31 117 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 SHISA9B4DS77 424 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 TMEM178BH3BS89 294 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 NTN3O00634 580 aaPredicted RBP9.19□□□□□ -0.94
GCN1-201ENST00000300648 IGHV1-46P01743 117 aa9.19□□□□□ -0.94
GCN1-201ENST00000300648 EGR2P11161 476 aaPredicted RBP9.18□□□□□ -0.94
GCN1-201ENST00000300648 NKAPP1Q8N9T2 125 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 AMN1Q8IY45 258 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 C9orf106Q8NAJ2 232 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 SPXQ9BT56 116 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 EFNA4P52798 201 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 PRSS47A8MTI9 375 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 MRPL55Q7Z7F7 128 aaKnown RBP9.18□□□□□ -0.94
GCN1-201ENST00000300648 TP53TG1Q9Y2A0 90 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 IGKV1D-8A0A087WSZ0 117 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 UBE2DNLQ8IWF7 75 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 TMEM200BQ69YZ2 307 aa9.18□□□□□ -0.94
GCN1-201ENST00000300648 PPIFP30405 207 aaKnown RBP9.17□□□□□ -0.94
GCN1-201ENST00000300648 MESP1Q9BRJ9 268 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 FGF6P10767 208 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 RHOHQ15669 191 aa9.17□□□□□ -0.94
GCN1-201ENST00000300648 TSSC4Q9Y5U2 329 aaPredicted RBP9.17□□□□□ -0.94
GCN1-201ENST00000300648 EXPH5Q8NEV8 1989 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms