RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 TNCP24821 2201 aa11.18□□□□□ -0.62
FUBP1-201ENST00000294623 H7C1H1 209 aa11.18□□□□□ -0.62
FUBP1-201ENST00000294623 WT1P19544 449 aaPredicted RBP11.18□□□□□ -0.62
FUBP1-201ENST00000294623 UBE2D1P51668 147 aa11.18□□□□□ -0.62
FUBP1-201ENST00000294623 MAPKAPK5-AS1Q8N8E1 139 aa11.18□□□□□ -0.62
FUBP1-201ENST00000294623 CITED1Q99966 193 aa11.18□□□□□ -0.62
FUBP1-201ENST00000294623 CACNA1EQ15878 2313 aa11.18□□□□□ -0.62
FUBP1-201ENST00000294623 A8MWV9 139 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 K7EMI3 77 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 MRPS12O15235 138 aaKnown RBP11.17□□□□□ -0.62
FUBP1-201ENST00000294623 IGHV3-48P01763 117 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 GLRXP35754 106 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 TMEM160Q9NX00 188 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 MRPL35Q9NZE8 188 aaKnown RBP11.17□□□□□ -0.62
FUBP1-201ENST00000294623 IGLV2-18A0A075B6J9 118 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 IGLV3-9A0A075B6K5 115 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 TRAV40A0A0B4J280 105 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 F8VRH5 84 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 TNFRSF13BO14836 293 aaPredicted RBP11.17□□□□□ -0.62
FUBP1-201ENST00000294623 SLC25A16P16260 332 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 LAGE3Q14657 143 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 TTTY13Q9BZ97 58 aa11.17□□□□□ -0.62
FUBP1-201ENST00000294623 RHODO00212 210 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 FXYD7P58549 80 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 MRGPRG-AS1Q2M3A8 158 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 NFE4Q86UQ8 179 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 SS18L2Q9UHA2 77 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 CRYGBP07316 175 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 CXCL12P48061 93 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 HES3Q5TGS1 186 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 C8orf49Q96NF6 230 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 DEFB127Q9H1M4 99 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 C5orf42Q9H799 3197 aa11.16□□□□□ -0.62
FUBP1-201ENST00000294623 SMKR1H3BMG3 65 aa11.15□□□□□ -0.62
FUBP1-201ENST00000294623 HCP5Q6MZN7 132 aa11.15□□□□□ -0.62
FUBP1-201ENST00000294623 PRR25Q96S07 402 aa11.15□□□□□ -0.62
FUBP1-201ENST00000294623 RAB1BQ9H0U4 201 aa11.15□□□□□ -0.62
FUBP1-201ENST00000294623 PCNX2A6NKB5 2137 aa11.15□□□□□ -0.63
FUBP1-201ENST00000294623 TRBV7-9A0A0J9YWB2 115 aa11.15□□□□□ -0.63
FUBP1-201ENST00000294623 I3L2K1 104 aa11.15□□□□□ -0.63
FUBP1-201ENST00000294623 WFDC3Q8IUB2 231 aa11.15□□□□□ -0.63
FUBP1-201ENST00000294623 SPRY4Q9C004 299 aa11.15□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE12JA6NER3 117 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE7O76087 117 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 IGHG3P01860 377 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 RBP4P02753 201 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE12FP0CL80 117 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE12GP0CL81 117 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE12IP0CL82 117 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE4Q13068 117 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 CARD19Q96LW7 228 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 LINC01600Q96MT4 127 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 CCL13Q99616 98 aa11.14□□□□□ -0.63
FUBP1-201ENST00000294623 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
FUBP1-201ENST00000294623 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
FUBP1-201ENST00000294623 SLC25A15Q9Y619 301 aa11.13□□□□□ -0.63
FUBP1-201ENST00000294623 KIAA0100Q14667 2235 aaKnown RBP11.13□□□□□ -0.63
FUBP1-201ENST00000294623 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
FUBP1-201ENST00000294623 PSMB2P49721 201 aa11.13□□□□□ -0.63
FUBP1-201ENST00000294623 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
FUBP1-201ENST00000294623 FHL3Q13643 280 aa11.13□□□□□ -0.63
FUBP1-201ENST00000294623 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
FUBP1-201ENST00000294623 LINC01549A6NIU2 74 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 SPRY3O43610 288 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 IGKV1-17P01599 117 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 MRPL23Q16540 153 aaKnown RBP11.12□□□□□ -0.63
FUBP1-201ENST00000294623 PMS2CLQ68D20 193 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 FAM216BQ8N7L0 139 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 RNF125Q96EQ8 232 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 RNF5Q99942 180 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 CENPVL3A0A0U1RRI6 287 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 FABP5P3A8MUU1 101 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE2EQ4V326 116 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 RUSC1-AS1Q66K80 236 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 Q71RC1 249 aaPredicted RBP11.12□□□□□ -0.63
FUBP1-201ENST00000294623 GAGE2DQ9UEU5 116 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 RAI1Q7Z5J4 1906 aaPredicted RBP11.12□□□□□ -0.63
FUBP1-201ENST00000294623 DSCAMO60469 2012 aa11.12□□□□□ -0.63
FUBP1-201ENST00000294623 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 TMEM78Q5T7P6 136 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 CNEP1R1Q8N9A8 125 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 PROCRQ9UNN8 238 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 RAXQ9Y2V3 346 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 UNC80Q8N2C7 3258 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 TEX22C9J3V5 150 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
FUBP1-201ENST00000294623 GATA3P23771 443 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 PRR30Q53SZ7 412 aaPredicted RBP11.11□□□□□ -0.63
FUBP1-201ENST00000294623 PRR14LQ5THK1 2151 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 DUX4L9Q6RFH8 374 aaPredicted RBP11.11□□□□□ -0.63
FUBP1-201ENST00000294623 ZNF491Q8N8L2 437 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 FBXL15Q9H469 300 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 ZNRD1Q9P1U0 126 aa11.11□□□□□ -0.63
FUBP1-201ENST00000294623 SIGLEC9Q9Y336 463 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms