RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 OR4X2Q8NGF9 303 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 Q9H3A6 140 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 F11RQ9Y624 299 aaKnown RBP8.24□□□□□ -1.09
SKA1-201ENST00000285116 SPCS1Q9Y6A9 102 aa8.24□□□□□ -1.09
SKA1-201ENST00000285116 C16orf97H3BN30 126 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 SLC25A17O43808 307 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 COL8A1P27658 744 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 TMEM133Q9H2Q1 129 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 PLAUP00749 431 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 IGLV2-11P01706 119 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 DIAPH2-AS1Q14236 149 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 LYPD1Q8N2G4 141 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 TPSG1Q9NRR2 321 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 CTSZQ9UBR2 303 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 HIGD1AQ9Y241 93 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 TEX22C9J3V5 150 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 IGLV1-47P01700 117 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 LGALS9BQ3B8N2 356 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 LGALS9CQ6DKI2 356 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 SIGLEC9Q9Y336 463 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 HILPDAQ9Y5L2 63 aa8.23□□□□□ -1.09
SKA1-201ENST00000285116 THBDP07204 575 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 RIGQ13278 110 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 ADAMTSL5Q6ZMM2 481 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 TMEM75Q8N9X5 138 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 NAA38Q9BRA0 125 aaKnown RBP8.22□□□□□ -1.09
SKA1-201ENST00000285116 SONP18583 2426 aaKnown RBP8.22□□□□□ -1.09
SKA1-201ENST00000285116 FABP2P12104 132 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 ORM2P19652 201 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 Q6AWC8 147 aa8.22□□□□□ -1.09
SKA1-201ENST00000285116 RUSC1-AS1Q66K80 236 aa8.21□□□□□ -1.09
SKA1-201ENST00000285116 LYPD2Q6UXB3 125 aa8.21□□□□□ -1.09
SKA1-201ENST00000285116 RITA1Q96K30 269 aa8.21□□□□□ -1.09
SKA1-201ENST00000285116 THYN1Q9P016 225 aa8.21□□□□□ -1.09
SKA1-201ENST00000285116 I3L2K1 104 aa8.21□□□□□ -1.1
SKA1-201ENST00000285116 BSPH1Q075Z2 132 aa8.21□□□□□ -1.1
SKA1-201ENST00000285116 OR8A1Q8NGG7 326 aa8.21□□□□□ -1.1
SKA1-201ENST00000285116 RNASE6Q93091 150 aaKnown RBP8.21□□□□□ -1.1
SKA1-201ENST00000285116 RAB37Q96AX2 223 aa8.21□□□□□ -1.1
SKA1-201ENST00000285116 SELENOKQ9Y6D0 94 aa8.21□□□□□ -1.1
SKA1-201ENST00000285116 A0A0G2JNJ9 132 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 PPIAL4GP0DN37 164 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 Q9UFV3 132 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 ACANP16112 2415 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 TMEM189A5PLL7 270 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 GNG7O60262 68 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 COX8CQ7Z4L0 72 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 PIP4P2Q8N4L2 257 aa8.2□□□□□ -1.1
SKA1-201ENST00000285116 SLC25A39Q9BZJ4 359 aaPredicted RBP8.2□□□□□ -1.1
SKA1-201ENST00000285116 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
SKA1-201ENST00000285116 ARMS2P0C7Q2 107 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 BMI1P35226 326 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 PSG3Q16557 428 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 PPP1R27Q86WC6 154 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 CIARTQ8N365 385 aaPredicted RBP8.19□□□□□ -1.1
SKA1-201ENST00000285116 ZNF48Q96MX3 618 aaPredicted RBP8.19□□□□□ -1.1
SKA1-201ENST00000285116 SHANK2-AS3Q9BTD1 123 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 A0A096LNJ9 63 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 IGHV1-3A0A0C4DH29 117 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 H3BRN7 92 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 IGHV3-48P01763 117 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 RPL24P83731 157 aaKnown RBP8.19□□□□□ -1.1
SKA1-201ENST00000285116 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 ZNF493Q6ZR52 646 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 C1orf122Q6ZSJ8 110 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 SIGMAR1Q99720 223 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 TRBV19A0A075B6N1 114 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 ZNF785A8K8V0 405 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 LY6LH3BQJ8 138 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 BUB1B-PAK6H3BSN5 160 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 HCP5Q6MZN7 132 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 SMPXQ9UHP9 88 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 INSIG2Q9Y5U4 225 aa8.19□□□□□ -1.1
SKA1-201ENST00000285116 TENM4Q6N022 2769 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 SERTM2A0A1B0GWG4 89 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 AZU1P20160 251 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 IFI27P40305 119 aaPredicted RBP8.18□□□□□ -1.1
SKA1-201ENST00000285116 CACNG7P62955 275 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 PRSS57Q6UWY2 283 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 PRNTQ86SH4 94 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 SRSF12Q8WXF0 261 aaKnown RBP8.18□□□□□ -1.1
SKA1-201ENST00000285116 NAV3Q8IVL0 2385 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.18□□□□□ -1.1
SKA1-201ENST00000285116 PPIAL4CA0A0B4J2A2 164 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 SHISA9B4DS77 424 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
SKA1-201ENST00000285116 PDE6HQ13956 83 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 CCL17Q92583 94 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 NGBQ9NPG2 151 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 U3KQK5 164 aa8.18□□□□□ -1.1
SKA1-201ENST00000285116 TRAV8-1A0A0A6YYK1 113 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 IGKV1-17P01599 117 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 FAM106CPP0CH98 169 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 CT45A10P0DMU9 189 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 FAM106AQ4KMX7 169 aa8.17□□□□□ -1.1
SKA1-201ENST00000285116 PSMG4Q5JS54 123 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms