RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 CARD19Q96LW7 228 aa7.15□□□□□ -1.26
NIPBL-201ENST00000282516 ID3Q02535 119 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 MORN5Q5VZ52 161 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 WBP1Q96G27 269 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 C9orf106Q8NAJ2 232 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 SRSF8Q9BRL6 282 aaKnown RBP7.15□□□□□ -1.27
NIPBL-201ENST00000282516 ZSWIM8A7E2V4 1837 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 FOXG1P55316 489 aaPredicted RBP7.15□□□□□ -1.27
NIPBL-201ENST00000282516 C2CD3Q4AC94 2353 aa7.15□□□□□ -1.27
NIPBL-201ENST00000282516 IGHV1-3A0A0C4DH29 117 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 A0A1W2PR77 199 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 IGHV1-8P0DP01 117 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SRSF2Q01130 221 aaKnown RBP7.14□□□□□ -1.27
NIPBL-201ENST00000282516 VWC2Q2TAL6 325 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SPATA31B1PQ5VZV4 182 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 ZNF329Q86UD4 541 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 LY6G6FQ5SQ64 297 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SP7Q8TDD2 431 aaPredicted RBP7.14□□□□□ -1.27
NIPBL-201ENST00000282516 HLA-DMBP28068 263 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 ANKRD29Q8N6D5 301 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 CSRP2Q16527 193 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 POU2AF1Q16633 256 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 IGHG2P01859 326 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 NDPQ00604 133 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SPATA25Q9BR10 227 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 COL18A1P39060 1754 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 NRXN2Q9P2S2 1712 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 TEX48A0A1B0GUV7 120 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 ANXA2RQ3ZCQ2 193 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SVIPQ8NHG7 77 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SMIM2Q9BVW6 85 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SELENOKQ9Y6D0 94 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 APOC4P55056 127 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 SLAQ13239 276 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 ATP6V0BQ99437 205 aa7.14□□□□□ -1.27
NIPBL-201ENST00000282516 PLXNA2O75051 1894 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 SMKR1H3BMG3 65 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 TICRRQ7Z2Z1 1910 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 COLCA2A8K830 154 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 CFPP27918 469 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 PFN2P35080 140 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 EFNA4P52798 201 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 C3orf56Q8N813 242 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 BAALCQ8WXS3 180 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 SHANK2-AS3Q9BTD1 123 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 E9PLN8 166 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 FNDC10F2Z333 226 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 GLRX5Q86SX6 157 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 AMN1Q8IY45 258 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 NDUFA12Q9UI09 145 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 IGHV1-24A0A0C4DH33 117 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 PFN1P07737 140 aaKnown RBP7.13□□□□□ -1.27
NIPBL-201ENST00000282516 SYNJ2BPP57105 145 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 UBE2E2Q96LR5 201 aa7.13□□□□□ -1.27
NIPBL-201ENST00000282516 H0YJW9 148 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 IGHV1-46P01743 117 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 TAL2Q16559 108 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 MUC6Q6W4X9 2439 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 TIAF1O95411 115 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 HERVK_113P63121 156 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 MRPL14Q6P1L8 145 aaKnown RBP7.12□□□□□ -1.27
NIPBL-201ENST00000282516 Q8N8P6 123 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 WFDC9Q8NEX5 89 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 C1orf43Q9BWL3 253 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 VSIRQ9H7M9 311 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 ZNF492Q9P255 531 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 HIVEP2P31629 2446 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 H3BQ85 93 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 RNASE2P10153 161 aaKnown RBP7.12□□□□□ -1.27
NIPBL-201ENST00000282516 BTCP35070 178 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 TSSC4Q9Y5U2 329 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-201ENST00000282516 IGLV3-32A0A0A0MS00 114 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 FGF6P10767 208 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 TMEM256Q8N2U0 113 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 C1QCP02747 245 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 C20orf144Q9BQM9 153 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 ORMDL1Q9P0S3 153 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 SRRM5B3KS81 715 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 GAGE7O76087 117 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 GAGE12FP0CL80 117 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 GAGE12GP0CL81 117 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 GAGE12IP0CL82 117 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 UBE2BP63146 152 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 KLHDC3Q9BQ90 382 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 RHPN1-AS1Q9BWJ2 59 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.12□□□□□ -1.27
NIPBL-201ENST00000282516 E9PQ18 207 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 H3BUX3 64 aa7.12□□□□□ -1.27
NIPBL-201ENST00000282516 FNDC1Q4ZHG4 1894 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-201ENST00000282516 COL11A2P13942 1736 aaPredicted RBP7.11□□□□□ -1.27
NIPBL-201ENST00000282516 PRSS46E5RG02 174 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 PRO1854Q9UHT4 67 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 BMPERQ8N8U9 685 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 DEFB104AQ8WTQ1 72 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 CLPSP04118 112 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 NMSQ5H8A3 153 aa7.11□□□□□ -1.27
NIPBL-201ENST00000282516 TNRC6BQ9UPQ9 1833 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms