RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 DEFB133Q30KQ1 61 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 VN1R4Q7Z5H5 301 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 Q8N1Y9 231 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 TMEM74BQ9NUR3 256 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 KIAA1671Q9BY89 1806 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 NCKAP5O14513 1909 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 IFI6P09912 130 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 ZNF117Q03924 483 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 WDR38Q5JTN6 314 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 ZNF645Q8N7E2 425 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 PRR26Q8N8Z3 221 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 MORN4Q8NDC4 146 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 PLA2G2EQ9NZK7 142 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 TRAV17A0A0B4J275 112 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 LINC01565O15544 149 aa7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 TCF20Q9UGU0 1960 aaKnown RBP7.09□□□□□ -1.27
CTDSPL-201ENST00000273179 SPTY2D1-AS1A0A0U1RR47 76 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 ZNF138P52744 262 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 LINC00643Q86TS7 51 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 C20orf197Q8N268 126 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 Q8NA96 180 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 TXNDC17Q9BRA2 123 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 C6orf106Q9H6K1 298 aaPredicted RBP7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 TP53TG3Q9ULZ0 132 aa7.09□□□□□ -1.28
CTDSPL-201ENST00000273179 PRR20EP86478 221 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 PRR20CP86479 221 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 PRR20DP86480 221 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 PRR20BP86481 221 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 PRR20AP86496 221 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 CSRP2Q16527 193 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 SPANXN5Q5MJ07 72 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 C2orf91Q6ZV80 131 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 CCL4L1Q8NHW4 92 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 SCRT1Q9BWW7 348 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 TRPM6Q9BX84 2022 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 DPH3P1Q9H4G8 78 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 FREM2Q5SZK8 3169 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 EPOPA6NHQ4 379 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 CA6P23280 308 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 CLEC19AQ6UXS0 136 aa7.08□□□□□ -1.28
CTDSPL-201ENST00000273179 IGHV1-45A0A0A0MS14 117 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 TAS2R4Q9NYW5 299 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 Q96M85 177 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 VSIG8P0DPA2 414 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 SUMO2P61956 95 aaKnown RBP7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 SS18Q15532 418 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 TMEM92Q6UXU6 159 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 C20orf204Q6ZNR8 217 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 PCP2Q8IVA1 136 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 TMEM75Q8N9X5 138 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 PSENENQ9NZ42 101 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 DENND4CQ5VZ89 1909 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 TRAV8-3A0A0A6YYJ7 113 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 IZUMO1RA6ND01 250 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 K7EMI3 77 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 LYZL2Q7Z4W2 148 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 PATE1Q8WXA2 126 aa7.07□□□□□ -1.28
CTDSPL-201ENST00000273179 IAPPP10997 89 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 MBD6Q96DN6 1003 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 LYZL4Q96KX0 146 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 PGLYRP4Q96LB8 373 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 C4orf45Q96LM5 186 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 RNF7Q9UBF6 113 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 PEX7O00628 323 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 TFF1P04155 84 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 C4orf51C9J302 202 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 DNAL4O96015 105 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 DSCR4P56555 118 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 RPS11P62280 158 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 SRSF12Q8WXF0 261 aaKnown RBP7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 PLXNB3Q9ULL4 1909 aa7.06□□□□□ -1.28
CTDSPL-201ENST00000273179 LOC389332A0A1B0GUA5 103 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 ZNF799Q96GE5 643 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 LTBP2Q14767 1821 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 CNTRLQ7Z7A1 2325 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 IGHV1-58A0A0C4DH39 117 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 MORN5Q5VZ52 161 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 VSIG2Q96IQ7 327 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 C17orf77Q96MU5 243 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 TRBV19A0A075B6N1 114 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 C2orf70A6NJV1 201 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 PRR32B1ATL7 298 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 IGKV1D-16P01601 117 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 PAPPA-AS1Q5QFB9 102 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 SOSTDC1Q6X4U4 206 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 C17orf100A8MU93 164 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 M0R3E3 92 aa7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 TNRC18O15417 2968 aaPredicted RBP7.05□□□□□ -1.28
CTDSPL-201ENST00000273179 PIP4P1Q86T03 277 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 UBE2BP63146 152 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 MRPS36P82909 103 aaKnown RBP7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 TFF2Q03403 129 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 GUSBP11Q6P575 273 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 SLC25A15Q9Y619 301 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 OXTP01178 125 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 CCL1P22362 96 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 SLC50A1Q9BRV3 221 aa7.04□□□□□ -1.28
CTDSPL-201ENST00000273179 IGKV1-8A0A0C4DH67 115 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 COX7A2P2O60397 106 aa7.03□□□□□ -1.28
CTDSPL-201ENST00000273179 IFI27P40305 119 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms